KEGG   Streptococcus pneumoniae SPN994038 (serotype 3): SPN994038_08270
Entry
SPN994038_08270   CDS       T02630                                 
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
spnm  Streptococcus pneumoniae SPN994038 (serotype 3)
Pathway
spnm03030  DNA replication
spnm03430  Mismatch repair
spnm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spnm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPN994038_08270 (holB)
   03430 Mismatch repair
    SPN994038_08270 (holB)
   03440 Homologous recombination
    SPN994038_08270 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spnm03032]
    SPN994038_08270 (holB)
   03400 DNA repair and recombination proteins [BR:spnm03400]
    SPN994038_08270 (holB)
Enzymes [BR:spnm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SPN994038_08270 (holB)
DNA replication proteins [BR:spnm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SPN994038_08270 (holB)
DNA repair and recombination proteins [BR:spnm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SPN994038_08270 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA
Other DBs
NCBI-ProteinID: CCP30563
Position
844408..845298
AA seq 296 aa
MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFGSLEMAQFLAKSLFCTDKVGVLPC
EKCRSCKLIEQEEFPDVTLIKPVNQVIKTERIRELVGQFSQAGIESQQQVFIIEQADKMH
PNAANSLLKVIEEPQSEVYIFFLTSDEEKMLPTIRSRTQIFHFKKQEEKLILLLEQMGLV
KKKATLLAKFSQSRAEAEKLANQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADD
KEKQDQVLRILEVLCGQDLLQVRVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaaacaagatcaactaaaggcttggcaaccagctcagtttgaccgttttgtccgtatc
ttagaacaagaccagctcaatcacgcctatctcttttcaggtttctttggaagcttggaa
atggcgcaatttttagctaagagcctcttttgtacggataaagttggcgtcttaccatgt
gagaaatgccgaagttgcaagctgattgaacaggaagagtttccagatgtcaccttgatt
aagccagtcaatcaggtcatcaagacagaacgcattcgggaattggtgggacagttttct
caagcagggattgaaagccagcaacaggtctttattatcgagcaagcggataaaatgcat
cccaacgcagccaattctctgctcaaggtcatcgaagaaccccagagtgaagtttatatt
ttcttcttgactagcgatgaggaaaagatgttaccgacaatccgaagtcggactcagatc
ttccactttaaaaagcaagaagaaaaacttatcttactcttagaacaaatgggacttgtt
aagaaaaaagcgactcttttagctaagtttagtcaatcgcgagctgaagcagaaaagttg
gctaatcaggcaagtttttggaccttggtcgatgaaagtgaacgcctgctgacttggtta
gtagctaagaaaaaagaaagttatctacaggttgccaaattagccaacttggcagatgat
aaggaaaaacaggatcaggttttacggattcttgaagttctctgtgggcaggacctcttg
caggtaagagtaagagtgattctacaagatttactagaagctagaaaaatgtggcaagct
aatgtcagctttcaaaatgccatggaatatctggtcttgaaagaaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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