KEGG   Streptococcus pneumoniae SPN994039 (serotype 3): SPN994039_13800
Entry
SPN994039_13800   CDS       T02631                                 
Name
(GenBank) DEAD box helicase family protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
spno  Streptococcus pneumoniae SPN994039 (serotype 3)
Pathway
spno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPN994039_13800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spno03019]
    SPN994039_13800
   03009 Ribosome biogenesis [BR:spno03009]
    SPN994039_13800
Enzymes [BR:spno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPN994039_13800
Messenger RNA biogenesis [BR:spno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SPN994039_13800
Ribosome biogenesis [BR:spno03009]
 Prokaryotic type
  rRNA helicases
   SPN994039_13800
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_22
Other DBs
NCBI-ProteinID: CCP35074
Position
complement(1401387..1402961)
AA seq 524 aa
MKFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVAQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLQIIENLTKK
RMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEFTPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKAKGGRGGRRGDDRRERDRRGNGRRD
EFKKGSRGNDRFDKEKRYRKDNKKPRNTLSEKQTGFVIRNKGDK
NT seq 1575 nt   +upstreamnt  +downstreamnt
gtgaaatttaatgaattaaacttgtctgctgatttgctagcagaaattgaaaaagctggt
tttgtagaagctagtcctatccaagaacaaactattcctttggcccttgaaggcaaggat
gttatcggtcaagctcagactggtacaggaaaaactgcagcctttggcttgcctaccctt
gaaaaaatccgtacagaagaagcgactatccaagctttggtcatcgctccaactcgtgaa
ctagctgttcaaagtcaagaagaactcttccgctttggtcgtagtaagggagtcaaagtc
cgttcagtatatggcggatcaagcattgaaaaacaaattaaggctcttaaatctggtgcc
catatcgtggtgggaactccaggtcgcctcttggacttgattaaacgcaaggccttgaaa
ttacaagacattgaaacccttatccttgacgaagcggatgaaatgcttaacatgggcttc
cttgaagacatcgaagccattatttcccgtgtacctgagaaccgtcaaactttgcttttc
tcagcaactatgccagatgccatcaaacgtatcggtgttcagtttatgaaagcccctgaa
catgtcaagattgcggctaaggaattgacaacagaattggttgaccagtactatatccgt
gttaaggaacaagaaaaatttgacaccatgactcgtctcatggatgtggcacaaccagaa
ctcgctattgtatttggtcgtaccaaacgccgtgtggatgaattgactcgtggtttgaaa
attcgtggcttccgtgcagaaggaattcatggcgacctagaccaaaacaaacgtcttcgt
gtccttcgtgactttaaaaatggcaatcttgatgttttggttgcgacagacgttgcagcg
cgtggtttggatatttcaggtgtgacccatgtctacaactacgatattccacaagatcct
gagagttatgttcaccgtatcggtcgtacaggtcgtgctggtaagtcaggtcaatctatt
acttttgtttctccaaacgaaatgggttaccttcaaatcattgaaaacttgactaagaaa
cgcatgaaaggtctcaaacctgcaagtgtagaagaatccttccaatcaaaaaaacaggta
gctctcaagaaaatcgaacgtgattttgcagatgaaaccattcgtgccaactttgagaaa
tttggtaaggatgctcgcaaattggctgctgagtttactccagaagaattggcaatgtat
atcttgagtctgacagtccaagatccagatagccttccagaagtggagattgcacgtgaa
aaaccactaccgtttaaaccatcaggtaatggtttcggtggtaaagctaagggaggtcgt
ggaggccgtcgtggggacgaccgtcgagagcgtgatcgccgtggcaatggtcgccgtgat
gagttcaaaaaaggaagtcgtggcaacgatcgttttgataaggaaaaacgttaccgtaag
gataataaaaaaccacgcaatactttaagcgaaaagcaaacaggctttgttattcgtaac
aagggcgataaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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