KEGG   Streptococcus pneumoniae SPN034183 (serotype 3): SPN034183_17250
Entry
SPN034183_17250   CDS       T02629                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
spnu  Streptococcus pneumoniae SPN034183 (serotype 3)
Pathway
spnu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:spnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPN034183_17250 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spnu03021]
    SPN034183_17250 (rpoB)
   03400 DNA repair and recombination proteins [BR:spnu03400]
    SPN034183_17250 (rpoB)
Enzymes [BR:spnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SPN034183_17250 (rpoB)
Transcription machinery [BR:spnu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SPN034183_17250 (rpoB)
DNA repair and recombination proteins [BR:spnu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SPN034183_17250 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 Peptidase_M23 NusG_add
Other DBs
NCBI-ProteinID: CCP33435
Position
complement(1747774..1751385)
AA seq 1203 aa
MAGHDVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKAFLDHGLKEVFEDVLPISNFTD
TMELEFVGYEIKEPKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELESDSKDIT
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVRNTVEKDIHKNPMDSRTDEALKE
IYERLRPGEPKTAESSRSLLVARFFDPRRYDLAAVGRYKINKKLNVKTRLLNQTIAEPLV
DPETGEILVEAGTIMTRSVIESIESHLDGDLNKIVYIPNDAAVVTEPVVLQKFKVIAPTD
PDRVVTIIGNANPDDKVRTVTPADILAEMSYFLNLAEGLGRVDDIDHLGNRRIRAVGELL
ANQVRLGLSRMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFVQTPYRKVDRETGVVTNEIVWLTADEEDEYTVAQANSRLNEDGTFAEKIVMGRH
QGVNQEYPANIVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPQAP
YVGTGMEYQAAHDSGAAVIAQYDGKVTYADADKVEVRREDGSLDVYHIQKFRRSNSGTAY
NQRTLVKVGDVVEKGDFIADGPSMENGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKD
DVYTSVHLEEYESETRDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRVNGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARTLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTILYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSTVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDINGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDQEVELRDLDEGMDEDVIHVDDLEKAREKAAQEAKAAFEAEEAEKATKAEATEEAA
EQE
NT seq 3612 nt   +upstreamnt  +downstreamnt
ttggcaggacatgacgttcaatacgggaaacatcgtacccgtcgtagtttttcaagaatc
aaagaagttcttgacttaccaaatttgattgaaattcaaactgactcattcaaagctttc
ctagaccacggtcttaaggaagtgtttgaagatgtattgccaatttcaaacttcacagac
acaatggagttggaatttgttggatatgaaatcaaggaaccaaaatacacgctagaagaa
gctcgtatccacgatgctagctactcagcaccaatttttgtaaccttccgcttgatcaat
aaagaaacaggcgaaatcaagacccaagaagttttctttggtgatttcccaatcatgaca
gaaatgggtactttcatcatcaatggtggtgaacgtattatcgtttctcagttggtccgc
tcaccaggtgtttactttaacgacaaagtagacaaaaatggtaaggtgggctatggttca
actgttatccctaaccgtggagcttggttggaacttgaaagcgactcaaaagatatcacc
tacactcgtatcgaccgtactcgtaagattccatttacaaccttggttcgtgctcttggt
ttctcaggtgatgatgaaatctttgatatctttggtgacagcgaattggttcgcaacact
gttgaaaaagatatccacaagaatccaatggactctcgtacagacgaagccttgaaagaa
atttacgaacgccttcgtccaggtgagcctaagacagctgaaagctcacgtagcttgctt
gtggctcgcttctttgacccacgtcgctatgacttggcagcagttggtcgttacaaaatc
aataaaaaactcaatgttaaaacacgtttgctcaaccaaaccattgcagagccattggta
gaccctgaaactggagaaatcttggtagaagctggtacgattatgactcgtagcgtgatt
gaaagcattgaaagccatttggatggcgacttgaacaagattgtctacatcccaaacgat
gcagccgttgtgactgagcctgttgttcttcaaaaattcaaggttattgctccaactgat
ccagatcgcgtcgtaacgatcattggtaatgctaacccagatgacaaggttcgtacggtg
actcctgcagatatccttgctgagatgagctacttcctcaacttggctgaaggacttggc
cgtgtagatgatatcgaccaccttggaaatcgtcgtatccgtgcggttggtgaattgctt
gccaaccaagtacgtttgggactttctcgtatggaacgtaatgtccgtgaacgtatgtct
gttcaggacaatgaagtcttgacaccacaacaaattatcaatatccgtcctgtaacagct
gcagttaaagaattctttggttcatcacagttgtcacagttcatggaccaacacaacccg
ctttctgagttgtctcacaaacgccgtttgtcagccttaggacctggtggtttgactcgt
gaccgtgctggatatgaagtacgtgacgtgcactacactcactatggtcgtatgtgtcca
atcgagacacctgaaggacctaacatcggtttgatcaataacttgtcatcttacggacac
ttgaacaaatatggttttgttcaaacaccataccgtaaggttgaccgtgaaacaggtgtt
gtcacgaacgaaattgtttggttgacagctgatgaagaagatgaatatactgtagctcag
gctaactctcgtctgaatgaagatggaacctttgctgagaagattgtcatgggacgtcac
caaggggtcaaccaagagtatccagctaatattgttgactacatggacgtttcaccaaaa
caggtagttgccgttgcgacagcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggagccaatatgcaacgtcaggctgtgccattgattaatcctcaggcacct
tacgttggtactggtatggaataccaagcagcccacgattctggtgcggctgtgattgct
cagtatgatggtaaagttacttacgcagatgctgacaaggtagaagttcgtcgtgaagat
ggttcattggatgtttaccacatccaaaaattccgtcgttcaaactcaggtactgcttac
aaccaacgcactctcgtaaaagttggtgatgtcgttgaaaaaggcgatttcatcgctgac
ggaccttctatggaaaatggagaaatggcgcttggacaaaacccaatcgttgcctacatg
acttgggaaggttacaacttcgaggatgccgttatcatgagcgaacgcttggtgaaggac
gatgtctacacatctgttcaccttgaagaatacgaatcagaaacgcgcgatacaaagctt
gggcctgaagaaatcactcgcgaaattccaaacgttggtgaagatgccctcaaagacctt
gacgaaatggggattatccgtattggtgctgaggttaaagaaggtgatattcttgtaggt
aaagtaacacctaagggtgagaaagatctttcagctgaagaacgtctcttgcacgctatc
tttggagacaagtctcgtgaagtgcgtgatacttctcttcgtgtaccacacggtgccgat
ggtgtcgttcgtgatgttaagatctttacacgtgtaaatggagatgagttgcaatcaggt
gttaacatgttggttcgtgtttacatcgctcaaaaacgtaagattaaggtcggagataaa
atggccggacgtcacggaaacaaaggggttgtctctcgtatcgttcctgtagaagacatg
ccttaccttccagacggaactccagtcgacatcatgttgaacccacttggggtgccatca
cgtatgaatatcggtcaggttatggagcttcaccttggtatggcagctcgtactcttggt
attcacattgcgacaccagtctttgatggagcaagttctgaagatctttggtcaactgtt
aaagaagcaggtatggatagcgatgccaagacaatcctttacgatggacgtacaggtgaa
ccatttgataaccgtgtttctgttggagtcatgtacatgatcaaactccaccacatggtt
gacgataaattgcatgcgcgttcagtcggaccttactcaactgttacccaacaaccactc
ggaggtaaagctcagtttggtggacaacgtttcggtgagatggaggtttgggctcttgaa
gcctacggtgcgtcaaatgtccttcaagaaatcttgacttacaagtcggacgatatcaac
ggacgtttgaaagcctatgaagctattacaaaaggcaaaccaattccaaaaccaggtgtt
ccagaatccttccgagttcttgtcaaagaattgcaatctcttggtcttgacatgcgtgtc
ctagacgaagatgaccaagaagtggaacttcgcgacttggatgaaggaatggacgaagat
gtcatccacgtagatgaccttgaaaaagcccgcgaaaaagcagcccaagaggctaaagca
gcctttgaagctgaagaagctgagaaagcaacaaaagcggaagcaacagaagaagctgct
gaacaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system