KEGG   Schizosaccharomyces pombe (fission yeast): SPAC1142.02c
Entry
SPAC1142.02c      CDS       T00076                                 
Name
(RefSeq) putative SGT2 family TPR repeat-containing protein
  KO
K16365  small glutamine-rich tetratricopeptide repeat-containing protein alpha
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03060  Protein export
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SPAC1142.02c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:spo03110]
    SPAC1142.02c
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    SPAC1142.02c
Chaperones and folding catalysts [BR:spo03110]
 Other chaperones and cochaperones
  Others
   SPAC1142.02c
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SPAC1142.02c
SSDB
Motif
Pfam: TPR_1 SGTA_dimer TPR_2 TPR_8 TPR_17 TPR_11 TPR_19 TPR_12 TPR_16 TPR_9 TPR_14 SHNi-TPR NatA_aux_su TPR-S BTAD Alkyl_sulf_dimr DUF4404 Caskin-tail
Other DBs
NCBI-GeneID: 2542401
NCBI-ProteinID: NP_001342950
PomBase: SPAC1142.02c
Ensembl: SPAC1142.02c
Position
I:complement(3627675..3629022)
AA seq 317 aa
MSSNKVTAAIIDYLKQAITTGSISEEEKESLEVAAQCIQDSFKIKPEEIKPKSGDRLVAA
FEEYEKLHPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYY
SNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDF
DPNNEVLKRGLEAANKQLNQPSDSSATSGADQARTSAGAAPDLGSIFGGGMPDLGSLMNN
PAVMNMARNLMQSGALNNIMNDPNIANMARNFQSGGGMPDLSSLANNPQLQNLARNFMNN
NNNGNTDNNNQGNPPPQ
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagctctaacaaagttactgcggctattattgactatttgaagcaagctattaccacc
ggttcgatttctgaagaagaaaaggaaagcttggaggttgctgctcaatgtattcaagat
tcttttaaaatcaaaccagaagaaattaagcccaagtcaggggatcgtttagttgctgct
tttgaggagtacgaaaaactgcatccagtggaggaggattccactgctcatgttaataaa
gaagaggctgagaaattaaaacttgaaggaaataatgccattgcggcaaaggattatcaa
aaagctttggatttatacactaaagccatagaaatcgatcctacctctccagtttactac
tccaatcgtgcagccgcgtataatcagctagggcaattcgaaaatgctgtagaagatgct
ttaacatgcttaagtttagatcctcatcatgctcgagcctttggacgacttggtcgtgcc
aaattgtcacttggcgatgcagcagcggcagctgatgcttataagaagggcttagacttt
gatcccaataatgaggttttaaagagaggtttggaagctgctaacaagcaattgaatcaa
ccatcggattcatccgctacttctggagctgaccaagctcgcacttctgctggtgccgct
cctgatcttggatccatttttggaggaggtatgcctgatttaggttctttgatgaacaat
cctgctgttatgaacatggcgcgtaacttgatgcaatcgggtgctttgaataatattatg
aatgaccctaatattgccaacatggcccgtaactttcaatctggaggaggtatgcctgac
ttgagttctcttgccaataacccccaactgcaaaatttggctcgcaattttatgaacaat
aacaataatggcaacactgataacaataaccaaggaaatcctccccctcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (50)   

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