KEGG T00076: SPAC12B10.01c

Schizosaccharomyces pombe (fission yeast): SPAC12B10.01c

Entry

SPAC12B10.01c CDS T00076

Definition

ubiquitin-protein ligase E3 (predicted)

Orthology

K10590

E3 ubiquitin-protein ligase TRIP12 [EC:6.3.2.19]

Organism

spo Schizosaccharomyces pombe (fission yeast)

Pathway

spo04120

Ubiquitin mediated proteolysis

Class

Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:spo04120]

SSDB

Motif

Pfam:

HECT CLASP_N

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

I:complement(4570498..4575441)

AA seq 1647 aa
MSVQAYTNTPNLPNLIHSESITNSPVFIPNLRSKSDNKHRLNTSEELPFTKKRRATKHFL
KMEVSAKISEPPSSKSVEFGRHLNMRHDFSELLEQPLTTSKTRVFKSFNEKLKGKPQLVK
SDKGVLPLNKQSDILNSYERVLSNASVDSALDKKAEVDIIPFDKSVMEPKNITFNDKSGL
TKFGNSNSYETTYSDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSG
SESYERDEDVDEEEEEDDDENNDEGDDEDENENDELRSENGSPNPSAAVINEQENMNMSG
IEEYDETNLLNELGRIRRGNQFQSLASSILSSGNLENSDDEDVSLGPQTYRFNSSFHPFR
SAFSAPGVQFGRLLEGIKDFSDPTVQMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSE
ILSGRNYDFGEVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCERMFDMQYIDIA
EQALGVLERLSKDFGICILEHRGMLAALQYFDFFYTTVQRTAISLAANCCKFLDESNASA
AEEIIPLLSNILQSSDTIVVSKAYSCLETIIESLKTSPNIIETIISEDLITTIVNALTNS
TSQNKSMHLQVQLLHIISSLCQSSSALILPFLNHNLPDVMYEMLCGIPPSDTSHQADMIT
MQSLYYCPIELIENLLRAITSLLPKNTSNLSDEFNTKLYRLNSILLTVVMDIYFIVPLHD
IRSLAVTTALKMLCSIRENNLDGLVCSLPLSSFIASILNSRKSDNFLKRDALEMCLFLLE
ALPNVYSSLFIREGVVQEVGFLVRSTNADMKKIKLSISFSQNKSAARHEELKNLSTLKSL
AKEFLSNYKEENLENSTLVQLKQLSKHLLSETKQDESFSELAKIFQEGSNITSHELLHSG
LIHNLLLSLKKFGSSSLRTFLLAMNTCDEREVLEFGNGPLVSLIFCLQNLLSTVENFQLS
TLPPDTENAVDHVFSRQFKLRLMALPGSRIRPPFRSLVVSINGLATIRTLDNYLHSRISV
RNETGRRFSILREAGSLRESMSGSSRNSSGDYTDSMSQDAPNHTTEPSERRDSSTSSHFE
EHFVFSLMGKKVPRNKTIFRILYEYIQLSDDHTLDDFWKTPVPIFYGEPDCIHNDMKGEL
NYENETEGFSINIREILDLLSILYYGIRDVHTLFPDKHFRGNIENILTDFSNWKLSAKLN
RQLEEQQLVVHGCLPSWCISLTSAYPFLVPFETRYLLLQSTAFGLSRSVSFLLSRNPELS
KNESSSILQFVSLHRQKIRISRKKIFNYALHLLATYAASENILEIEYEDEVGSGLGPTLE
FYTSVSKEFTLNSLDIWRNDQPNSKFVYQASGLFPSPIPLLGSSPENERKISLFFALGQF
VARSIYDSRIISIQFNPLFFARNIPLTISSVAKVDKGLANSLRYLEKLIPGKNPTNAETD
IKLEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNG
FSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQ
MNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKL
PEYSSSEVLGSRLSKAILEGQGSFHLS

NT seq 4944 nt +upstreamnt +downstreamnt
atgtctgttcaagcgtatacgaatactccgaatttaccgaatttaatacatagtgaatct
ataaccaactcacctgtgtttataccaaacctacgaagtaagtccgacaacaaacataga
ttaaacacttctgaagaattgccatttacaaagaaacgcagagcaactaaacatttttta
aaaatggaggtatctgccaaaatttctgaaccaccttctagtaaaagtgtggaatttgga
aggcatttaaatatgcggcatgatttttccgaattgcttgaacaaccacttacaacgagc
aaaactagggtctttaaatcctttaatgaaaagctcaaaggtaaaccccagttagtgaaa
tccgataaaggtgtgttgcctcttaataagcaatcggatatactgaattcttatgaacgc
gttttaagcaatgcttcggttgattctgcattagacaaaaaggcggaagttgatatcatt
ccatttgataaatcagttatggaaccaaagaacataacttttaatgacaaaagtggctta
accaagtttgggaattcaaactcttatgaaactacgtattctgactccagcaactatcat
acttctactgattcgtcccaatataatgaccaagatgaccacgtctatgatgatactaat
gatggaactgatgatgatataaataataacgagtacaaagacgatgaatccagtagtggc
agtgaaagttatgaaagagatgaagatgttgatgaagaggaggaagaagacgatgatgaa
aacaatgatgagggagacgatgaagatgaaaatgaaaatgacgagttaagaagcgaaaac
ggttcacctaatccttcagccgctgttattaatgaacaagaaaacatgaacatgagtgga
atcgaagaatacgatgaaactaacttgttaaatgaactgggaagaatcagaagaggtaat
cagtttcaaagtttagcgtcttctatactttcttccggtaatttggagaactctgatgac
gaagatgtttctttaggtccacagacataccgtttcaatagttcctttcatccttttcgt
tctgcattttctgctccaggtgttcaatttggacgcttgttagaaggaataaaggatttt
agtgatcctactgttcaaatgctttctcttcaagaactttccgaagcgtttgctatgagt
actgaagatatgcttgttggattgttttcaaccgattcatacattgcggctttttccgaa
atcttatctgggcgaaattatgatttcggagaagtctctattcaacttatgctatcctgt
actacctgtgtatctaatatgatggaagctttgcctttatgtatggctaaaatagcatat
agtcctattgttcgcattctgtgtgaaagaatgtttgatatgcaatacattgatattgct
gaacaagctttaggagttttagaacggctttctaaagattttggtatttgtattttggaa
cacagaggaatgttagctgctctccaatactttgattttttttatactacagttcaacgg
acagctatttctctggctgctaattgctgtaagtttttggatgaatccaatgcttccgca
gcagaagaaattattccattgctttctaatattctacaatcttctgataccatagtcgtt
agtaaggcatattcttgcctggagacaattattgaatctttgaaaacttcaccaaacata
attgaaacgataatttccgaggatttgatcaccactattgtcaatgctttgactaattct
acctcacaaaataagtcaatgcacttacaagtgcagctattacatataatatcatctttg
tgtcagtcatcttctgctttgattttaccttttcttaaccataatttgccggatgtgatg
tacgaaatgctgtgtggaataccaccttctgatacatcccatcaggctgatatgattaca
atgcaaagtttgtattattgtccgatcgagttaatagaaaacttgttaagagctataact
tctttgcttcctaaaaacactagtaacttgtctgatgaatttaacacgaaactatatcga
ttaaacagtatactcttaactgttgtaatggacatttattttattgtgccccttcatgat
atccgatcgttagctgtgactacggcattgaaaatgttatgttcaattagggaaaataat
ttagatggcttagtttgttctcttcctttatcatcattcattgcttcaattttaaattca
cgcaaatctgacaatttcttgaagcgagatgctttagaaatgtgtctatttttgcttgaa
gcacttcctaatgtttattcttcgttatttatacgagaaggcgttgtacaggaggttgga
tttttagttcgctctaccaatgcagacatgaagaaaataaagttaagtatttccttttca
caaaacaaatctgctgctcgtcatgaggagttgaagaatttatcgacgttaaagagcctt
gccaaggagtttctctctaattataaggaagaaaatttagaaaactcaacattagttcaa
cttaaacaattgtctaaacatttattaagtgagaccaaacaagacgaatctttttcagaa
ctagccaaaatatttcaagaaggatctaatattactagtcatgaattacttcattctgga
ttaattcataatttgcttttatcactcaaaaaatttggaagttcatctcttcgaacattt
ttgttagctatgaatacatgtgatgaacgcgaagttttagaatttggtaatggtccctta
gtttcacttatcttttgtttgcaaaatctactttcaactgttgagaattttcaactttca
acgttacccccagatactgagaatgcggtagatcatgttttttcgcggcagtttaaactt
cgtttaatggctcttccgggatcaagaattcgaccacctttccgatctcttgtcgtttct
attaatgggctagctactattcgtacacttgataattatcttcacagtcgcatttctgtg
cgtaatgaaactggacgtcgtttttcaatcctccgcgaggccggttctttgagggagtca
atgagtggatcatctcgtaactcttcaggagactatactgactcaatgtctcaagatgct
cctaatcacacaacagagccatcagagcgacgtgactcctcgacatcatcacatttcgag
gaacattttgtattcagtttgatgggtaaaaaggtaccccgaaacaaaacaatattcaga
attttatatgagtatatacagttgtctgacgatcatactctcgatgatttttggaaaact
cctgtcccaatattttatggtgagcctgattgcattcacaatgatatgaaaggggagtta
aactatgagaatgaaacagagggattttctataaatattagagaaatattggatttattg
agtattttgtattatgggattagagacgttcataccctctttcctgacaaacatttccgt
ggcaacattgaaaacattcttacagattttagcaactggaagttgagtgccaaattgaat
agacaacttgaagagcaacaacttgttgttcacggttgtttaccctcctggtgtatatca
ctaacctctgcatatccattcctagtaccgtttgaaactcgatatcttttattgcaatct
actgcttttggtttatcaagatccgtttcttttcttttgtcccgaaatcctgagctatca
aaaaacgaaagttcctccatacttcaatttgtcagcttacatcgccagaaaattcgtatt
tctcggaaaaaaatatttaattacgctttgcatttgcttgcaacttatgcggcttctgaa
aatattcttgaaatagaatacgaagatgaagttggttcaggtcttgggcccactttggag
ttctatacttcagtatctaaagaatttaccttaaattctctcgatatttggcggaatgat
caacccaactctaaatttgtgtaccaagcgtctggactttttccttctcctattccatta
ttagggtccagtccagaaaatgaaagaaaaatttcgttgttctttgctcttggacagttc
gttgcacgctcgatttatgattcaaggataataagcattcagtttaatccacttttcttt
gcacgaaatatacctttaaccatttcctctgtagcgaaagttgacaagggcttagctaac
tcgttacgatatttagagaaattaataccgggtaaaaaccctacaaacgccgagacggac
attaagcttgaagaccttcatctcgattttactctaccgggatttccgtctattgaactc
atacctgatggagctagtacacctgtgacaacattcaatgtgagtgattatttaaattat
gtcattgactatactgttggaaagggtgttcaacaacaattagaagcatttcaaaatggg
ttttccagcgtttttccttatacttctttgcaagttttgacagaacatgaattggtcaca
ctattcggtactgtcgatgaggattggagttacgcgaccttgatgaaatctatagtagca
gatcacggttacaccatggaaagtcctacaatccagagattactgactttgatgagtcaa
atgaattttcaagaacaaagagactttttgcaatttattactggaagccgaaaacttcct
attggaggatttgctggcctaaatcccccgttaactgttgttaggcgcttaaatgaacct
ccttatgtacctgatgattatcttccaagcgtgatgacttgtgtgaattatttgaaacta
cctgagtattcttcaagtgaggttttaggaagtcgactttctaaggctattttagaagga
cagggcagttttcatttatcctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB-SPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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