KEGG   Schizosaccharomyces pombe (fission yeast): SPAC16E8.16
Entry
SPAC16E8.16       CDS       T00076                                 
Name
(RefSeq) transcription factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SPAC16E8.16
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spo03021]
    SPAC16E8.16
Transcription machinery [BR:spo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     SPAC16E8.16
 Prokaryotic type
  Archaeal type
    TFB
     SPAC16E8.16
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon HTH_5 zf-ribbon_3 RB_B zf-RRN7 Sigma70_r4_2 HTH_23 Cyclin_N MerR
Other DBs
NCBI-GeneID: 2542339
NCBI-ProteinID: NP_594229
PomBase: SPAC16E8.16
Ensembl: SPAC16E8.16
UniProt: O13749
Position
I:3529970..3532143
AA seq 340 aa
MNAPSFTGLPTSMLSVKMICSECREDPPNLVEEFSSGDTVCGSCGLVLGDRIIDTRSEWR
TFSNSDEASGDPSRVGKVANPLLNGSQLDTTISSYDGAGAMLAKAQGRSVQVRGEKNLLT
AYKEIGAMCDAISLPKVIADTAKQLYKRVDDHKALKGKSSQSIIAACIYIACRQGKVPRT
FMEICTLTNVPKKEIGRVYKTLQRMLTEGGALHNSVDALKGHEYIQSSSTSAEDLMVRFC
NRLMLPMSVQSAAAELARRAGLQGTLAGRSPISIAASGIYMISALMGYPKTPKEISEVTG
VSDSTIRIAYKLLHAERKELIDPKWIANKAGNMDAMLPKP
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaacgcaccatcatttacaggtttgccgacgagcatgctttcggtcaaaatgatatgc
tctgaatgtcgggaagatcctcctaatctagttgaggaattttcgagtggtgataccgtt
tgtggaagctgtggattggttttgggtgatcgaattatcgatacgagaagtgaatggcgt
acgttctccaactctgatgaagctagtggagatcccagtcgtgtaggtaaagtggcgaat
ccactgttgaatggttctcaattagacacgacaatttcttcgtatgacggtgccggagcc
atgttggcaaaggctcaaggccgttccgttcaagttcgtggtgaaaagaatcttttaacc
gcatataaggagataggcgcaatgtgcgatgcaattagcttgccaaaggtaatcgctgac
accgcgaaacagttgtataagcgtgttgatgatcacaaggctttgaagggtaagtcatct
cagtccatcattgctgcttgcatttacattgcttgtcgtcaaggaaaggttccccgaact
tttatggagatatgcaccttgaccaatgtcccgaaaaaagaaataggtcgtgtctacaag
actcttcaacggatgctcactgaaggtggcgctctgcataattccgtggatgccttaaag
ggccacgagtacattcaaagcagttctacatcggctgaagatctcatggttcgcttttgt
aatcggcttatgcttcctatgtcggtgcaatcagccgctgctgaactggctcgtagagct
gggttgcaaggtacattggctggtcgttcacctatttctattgctgcaagcggaatatat
atgatttcggctctgatggggtatcctaaaactcctaaagagatatcagaagttactggt
gtaagtgattctacaatccgtattgcttataagcttttgcatgcggaacgaaaagagctg
attgatcctaaatggattgctaataaagctggtaatatggatgctatgttaccaaagcct
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (51)   

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