KEGG   Schizosaccharomyces pombe (fission yeast): SPAC18B11.02c
Entry
SPAC18B11.02c     CDS       T00076                                 
Name
(RefSeq) putative tRNA pseudouridylate synthase
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPAC18B11.02c
Enzymes [BR:spo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     SPAC18B11.02c
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SPAC18B11.02c
SSDB
Motif
Pfam: PseudoU_synth_2 Auto_anti-p27
Other DBs
NCBI-GeneID: 2542607
NCBI-ProteinID: NP_592881
PomBase: SPAC18B11.02c
Ensembl: SPAC18B11.02c
UniProt: Q09709
Position
I:313974..315335
AA seq 394 aa
MLKRPKRDPLKDCEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGY
YEKAIRNGQVKVNNQIGNVDTLIENGYIVSHHAHRHEPPVSDQPVGIVHEDESYVVIDKP
AGVPVHPTGRYNHNTVLHILMKENKCSLLYPCNRLDRLTSGLMFFSKSPKAAEEMRVHMI
SKSLKKEYVARVIGEFPNSGEVICDAPLLTVAPTLGLNRIHPDGKEASTVFKRIAFDGHT
SLVLCKPLTGRTHQLRVHLQYLGYPIANDPIYANKRVWGPSLGKNGEGSNESVIMRLSEI
GKTETASPLLQYEWYTNETEAEAKARRDKRLGELLTGKHCSECGTPLYSDPSPEELGIWL
HALKYESKDWSYKTQLPKWALDVCCRDPNALPIE
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgttaaaaagacctaaaagagatcctttgaaagattgtgaatacgtttttaaaggcgac
gggctacggcgagtccctccctactattatgaatacattaccttcgcgaagctgaggtgg
tacggtaaaactcttttagaggttttcaataccgaatttagggacagggaatctggttat
tatgaaaaggcaatacgcaatggtcaagttaaggtaaacaatcagattggtaacgttgac
acattgattgaaaatggatacatagtttcccatcatgcgcatcgtcatgaaccaccagtt
tctgaccaaccagtaggcatagtccatgaagatgaatcttatgttgttattgacaaacct
gctggtgttccagtgcatcctacaggtcgctataatcacaatactgttttacatattttg
atgaaagaaaacaaatgttctctgttatatccttgcaatagattagacagattaacttct
ggtctgatgttctttagtaagagtcctaaagccgctgaagaaatgcgcgtccatatgatt
agcaaaagcctgaaaaaagaatatgttgctagagtaataggagagttccccaattctggt
gaagtaatttgcgatgctccgttacttactgttgcacctactttaggtttaaataggatc
catccggatggaaaggaggccagcaccgttttcaaaagaattgcgtttgatggacacaca
tccctcgtgctttgtaaaccactgaccggaaggactcaccaattacgggttcatctacag
tatcttggttatcctattgctaatgatcctatatacgcgaataaaagggtatggggtcct
tctttagggaagaatggagaaggcagcaatgaatctgtaattatgcgactttccgaaatc
ggtaaaactgaaactgcttctccactcttgcaatatgagtggtatacaaatgaaacagag
gcagaggccaaggcccgtagagacaaacgcctcggggagctattaactggtaaacactgt
tccgagtgcggtactccactttatagtgatccatccccagaggaattaggaatctggtta
catgctttaaaatatgagagcaaagattggtcttataagacacagcttccaaaatgggct
cttgacgtttgctgccgagatcctaatgcgctgcctatagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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