KEGG   Schizosaccharomyces pombe (fission yeast): SPAC29A4.08cHelp
Entry
SPAC29A4.08c      CDS       T00076                                 

Gene name
prp19, cwf8
Definition
(RefSeq) ubiquitin-protein ligase E4
  KO
K10599  
pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
Spliceosome
Ubiquitin mediated proteolysis
Module
Spliceosome, 35S U5-snRNP
Brite
KEGG Orthology (KO) [BR:spo00001]
 Genetic Information Processing
  Transcription
   03040 Spliceosome
    SPAC29A4.08c (prp19)
  Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SPAC29A4.08c (prp19)
Enzymes [BR:spo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SPAC29A4.08c (prp19)
Spliceosome [BR:spo03041]
 Complex B
  Other components
   Prp19 complex
    SPAC29A4.08c (prp19)
 Complex C
   Prp19-CDC5 complex
    SPAC29A4.08c (prp19)
Ubiquitin system [BR:spo04121]
 Ubiquitin ligases (E3)
  U-box type E3
   SPAC29A4.08c (prp19)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic Type
  Other factors with a suspected DNA repair function
   PSO4 complex
    SPAC29A4.08c (prp19)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GI: 
NCBI-GeneID: 
PomBase: 
UniProt: 
Position
I:join(5133242..5133299,5133340..5133444,5133930..5135233)
Genome map
AA seq 488 aa AA seqDB search
MFCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPVKVPDFVR
PRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTK
ERDEAREALAKFSDNIGTVSSKTIEVQEVEMGESDDQLKTSLRSTVEKTFQELSSKRKRT
KLQPKWATDDAVSQLLQATPSTILENLETESTTSFFPSPENSSFVLCLHKDELLCLDIQS
NSTLKIFEGSALACCWLTSSKIAVATADAISIFEFPVSSSGLQSVGEPTSSIPIDEKVNF
LQAHPSGEYLLAASNEKCYIFSLKSQVYNITVAQHITSLAVHPDGNLFVAGLENGELRFF
ETSSGNELTKFGPHSSPVKTLQFGENGYWLVVTTNDDSDIFIWDLRKSELVQKIPLQTKV
AAVSLDITSQLLVSSDGETLYVHIYVKSSKSWRCMSQTHVSSISNLVWLNELHQLLFSTS
NGAILRLG
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atgttttgctcaatcagtggagaaacgccaaaagaaccggtgatttctcgtgtaagtgga
aatgtttacgagaagcgcttgattgaacaagttattcgtgaaacgtctaaagaccctgtt
actcaacaggaatgcacgttggaggacttggttcctgtaaaggtacctgattttgttaga
cctcgacctccttctgccacttcattgcctgcattgctgtctctctttcaagaagaatgg
gattctgtcgcgcttgagcaatttgaacttagaagaaatcttacagagacgaagcaggag
ttatcaacggcattgtattcgctagatgctgcgttaagagttatatctcggcttaccaaa
gaaagagacgaagctagagaagcattggcgaaattttccgataacataggcactgtttcc
tcgaaaactattgaagtacaagaggtagagatgggcgaaagtgatgaccagcttaaaact
agcttacgctctacggtggaaaaaacatttcaagaactttcttccaaaaggaaacgtaca
aagttacaacctaaatgggcgactgacgatgctgtgagtcagctcttgcaagctactcct
tctactatcttagaaaatttggaaacagaaagcactacgtctttcttcccgtcccctgaa
aattcttcttttgtattatgtcttcataaggatgaacttttatgtctagatatccaatcc
aacagtactctcaaaatttttgaaggatcagctttagcgtgttgttggttgacttcttcc
aagattgctgtcgctactgctgatgccatttcaatttttgaatttcctgtttcctcatct
ggtttacaaagtgtgggtgaacctacttcgtccattcctatagacgaaaaggtgaacttc
cttcaagctcatccaagtggggaatatttattagcagcatcaaacgaaaagtgttatatt
ttctccctgaaatcccaggtttataatatcaccgttgctcaacacattacatctcttgct
gtacatccggacggtaacctctttgtcgctgggttagagaatggcgagttacgctttttt
gagacttcctcgggaaatgagcttacaaaatttggaccacattcaagtccagttaaaaca
ttacaatttggtgaaaacggttattggcttgtagtaacaactaatgatgactctgacatt
ttcatttgggacttaagaaaatctgagcttgttcaaaaaatacccctacaaaccaaagtc
gcagcagtgtcattagatattactagtcaacttttggtaagttcggatggggagactctc
tatgtacatatttatgtcaaatcttcaaagtcttggagatgtatgagtcaaacccatgtt
tcctctatttctaatttggtttggttaaatgagttacaccagttgttgtttagtacttca
aatggagccattctccggttgggttaa

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