KEGG T00076: SPBC13G1.13

Schizosaccharomyces pombe (fission yeast): SPBC13G1.13

Entry

SPBC13G1.13 CDS T00076

Gene name

tfb2, SPBC31F10.01

Definition

transcription factor TFIIH complex subunit Tfb2

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

spo Schizosaccharomyces pombe (fission yeast)

Pathway

spo03022	Basal transcription factors
spo03420	Nucleotide excision repair

Module

spo_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:spo03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:spo03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

II:join(3754070..3754392,3754438..3755458)

AA seq 447 aa
MQAEFKSSINDFLEQLPNHARLYQKPAACLAVFRLLPILARQYVMSMLFNPMPVALSDFD
LWIKLSSKVYQSESFNKLVRMHIFQFDGQYITLNSEFRKQFITALTGGGNHNSFGVPCTD
EDKHLVTVDFLDAYAKETWETILHFMVGTPEAKFPGEGVLSLLKRGGLMSGPKNQLRITR
AGFQFLLQDINAQIWTLLLDYLKLSEDTHMDPVQVLHFLFMLGSLDLGRAYSVDFLTDTQ
QIMLEDLREYGLVYQRKITSKRFYPTRLATGLTTDYRSLHGKQSENDDDKGFIIVETNYR
LYAYTSSPLQIAIIGLFANLRARFSNLVVGVITRDSIRRALMNGIAAEQIITYLTTHAHP
QMRSNVPLLPPTLVDQIYLWELEKNRLRATPGILFRDFLTDSGFDQAVEYAKELGVLVWD
SSLKRMFFITTTGAQPMIAYLKRRAVK

NT seq 1344 nt +upstreamnt +downstreamnt
atgcaagcagaattcaagtctagtatcaacgacttcctggaacagttaccaaatcatgca
aggctttaccaaaagccagctgcttgtcttgctgtgtttcgtttattgccaattctagct
agacagtatgtcatgtctatgcttttcaatcctatgccagtagcactctcagatttcgat
ttatggatcaaactttcgagtaaagtttatcaatctgaatccttcaacaaactggttagg
atgcatatatttcaatttgatggacaatatatcactctaaatagtgaatttcgcaaacaa
tttataactgctctgactggaggaggaaatcacaattcgtttggcgtgccatgtaccgat
gaagacaagcacttggtgacggttgattttcttgacgcatatgcgaaagaaacttgggaa
acaatcttgcacttcatggtaggaactccggaagctaaatttcctggagaaggtgtctta
agtctattaaagcggggcggtttaatgtctggtccaaaaaaccagctacgtattacccgt
gccggttttcagtttctgttacaggatataaatgctcaaatttggacgttacttttggat
tatttaaaactatctgaagacacgcatatggatcctgttcaggttttgcactttttattt
atgcttggaagtttggatttggggagggcatactcagtggacttcttaacagatacacaa
caaatcatgcttgaagacctaagagaatatggattagtttatcaaagaaaaattacttcc
aagcgtttctatccaaccagactggcaacaggtctgacaactgattatcgctcattgcat
ggaaagcaaagtgaaaatgatgatgataaaggttttattattgtagaaacaaattaccga
ttatatgcttacacaagctccccattacagattgccatcatcggattgtttgctaactta
agggcgcgtttttcaaatcttgttgtcggtgtgataactcgggatagtattcgtcgtgct
ttgatgaatggaattgcagcggagcaaattattacatacttgacaactcatgctcaccct
cagatgagatcgaatgttcctcttttacctcctacattagtagatcaaatttatttatgg
gaattggaaaaaaatagacttcgggctactcctggaattttgtttcgcgattttcttact
gattctggcttcgaccaagcagtagagtacgcaaaagaactcggggttttggtttgggac
agttccttgaaaagaatgtttttcataactacgacaggcgcccagcccatgatcgcatac
ttgaaaagacgagctgtcaaatga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB-SPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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