KEGG T00076: SPBC16A3.05c

Schizosaccharomyces pombe (fission yeast): SPBC16A3.05c

Entry

SPBC16A3.05c CDS T00076

Gene name

rae1, cut21

Definition

RNA export factor, nucleoporin Rae1

Orthology

K14298

mRNA export factor

Organism

spo Schizosaccharomyces pombe (fission yeast)

Pathway

spo03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:spo03013]

SSDB

Motif

Pfam:

WD40 eIF2A

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

II:join(4288945..4289016,4289067..4289143,4289563..4290472)

AA seq 352 aa
MSLFGQATTSTVSNATGDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQ
ATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRC
VRFVEAMGTSPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAERN
ICVINLSEPTKIFKLAMSPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQNFS
FRCHRNQAGNSADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTIS
CSTFNRTGDIFAYAISYDWSKGYTFNNAQLPNKIMLHPVPQDEIKPRPKKGR

NT seq 1059 nt +upstreamnt +downstreamnt
atgtcactttttggacaggctacaacatctacagtatctaatgcaaccggtgacttaaaa
aaggatgtggaggttgcccaacccccggaggattcaatatcagatttggctttttctcct
caagcagaatatttagctgcatcatcttgggatagtaaagtccgtatttacgaagtgcaa
gctacagggcaatcaattggaaaagcactttatgaacaccaaggtccggtattaagtgtc
aattggtctcgagatggtaccaaagtagcatcaggaagtgtggataagtctgctaaagtc
tttgatattcaaacggggcaaaatcagcaggttgcggctcatgacgatgctgttcgttgc
gttcgtttcgttgaagctatgggtacttcacctattctggcaactgggtcatgggacaaa
accttgaaatattgggatcttcgacaatcaacacccattgctacagtcagtcttccagaa
cgtgtttatgcgatggattgtgttcatccattacttaccgttgcaaccgctgaaaggaac
atatgtgttatcaacttgtcggaaccaacgaaaatatttaaactggctatgagtccattg
aagttccagacaagatctttggcttgttttattaaaggtgatggttatgctataggaagc
gttgaaggaagatgtgcgatccaaaatatagatgaaaaaaatgcatctcaaaacttcagt
tttcgctgtcataggaatcaagcaggtaacagtgctgatgtttacagtgtaaattctata
gcatttcatccccaatatggaactttctcaaccgccggatctgatggtacttttagtttt
tgggataaagatagtcatcagcgtttaaagagttatccaaatgttggtgggactatttct
tgcagcacgtttaatcgtactggagatatttttgcttatgccattagttacgactggagt
aaaggttatacattcaacaatgcgcaattgcccaataaaatcatgctccaccctgttccg
caagacgaaataaaacctcgacctaagaaaggaaggtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB-SPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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