KEGG T00076: SPBC16E9.11c

Schizosaccharomyces pombe (fission yeast): SPBC16E9.11c

Entry

SPBC16E9.11c CDS T00076

Gene name

pub3

Definition

HECT-type ubiquitin-protein ligase Pub3 (predicted)

Orthology

K10591

E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]

Organism

spo Schizosaccharomyces pombe (fission yeast)

Pathway

spo04120	Ubiquitin mediated proteolysis
spo04144	Endocytosis

Class

Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:spo04120]
Cellular Processes; Transport and catabolism; Endocytosis [PATH:spo04144]

SSDB

Motif

Pfam:

HECT WW C2

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

II:complement(join(1935777..1937958,1938301..1938479))

AA seq 786 aa
MEQGAKRVRFYIVAADGLSKRDLFRQPDPFAILTVDGEQTHTTKVIKKSVNPYWNEGFEV
TVKPSSVISIRLFDQKKFKKKDQGFLGLVSFRMREVGSFRSNREVSLTRPLKKSSTTNLS
VLGNLVLKVAPSKIRAPAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSN
STRNGTSAATSNGTGTGAGTGASHRSSPVTNRQTNNTSALSNSNAHIMSSFEDQYGRLPP
GWERRADSLGRTYYVDHNTRTTTWTRPASSTNPVHNTSSDSQRLNHQNRHLPDDSNPSLM
QSDSGNDLPFGWEMRYTDTGRPYFVDHNTRTTTWVDPRNPLVRPNGGSSTVGSLMQPQSL
SHLGPLPSGWEMRLTNSARVYFVDHNTKTTTWDDPRLPSALDQDVPQYKCDFRRKLIYFR
SQPGMRPLPGQCNVKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREF
FFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAIFHRRFLD
AFFVVSLYKKLLRKKVSLADMESIDAEFYRSLKWVLENDITGILDLTFSVEEDHFGEVRT
VELITNGENIEVTEENKKKYVDLVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDERE
LELLIGGISDVDVEDWKSHTEYRTYIATDPVIKWFWEIIAGWKNEDRSKLLQFATGTSRI
PVNGFRDLQGSDGPRKFTIEKAGTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENT
VGFGNE

NT seq 2361 nt +upstreamnt +downstreamnt
atggaacaaggagcgaaaagagtccggttctacatagtagctgctgatggattaagtaaa
cgggatctttttcgacagcccgatccctttgctattttaacggtagatggcgagcaaact
catacaacgaaagttattaaaaaatcggtgaacccttattggaatgaaggatttgaagta
actgttaagccatctagcgttatatccatacgcctttttgatcagaaaaagttcaaaaag
aaagatcaaggcttccttggcttagtatcctttcgtatgcgtgaagttggtagttttcga
tcaaatcgcgaagtgtcgcttactcgaccattgaaaaaatcttccaccactaatctttcc
gttttgggaaatctcgtattgaaggtggccccgtctaaaattagggctcccgccggaaat
cactcatctactacagccaatcgcactactagtacacctacaaccacaactgcacgtact
actcgtactactccccgtccgactgccacaactaatacctcgaatcagtccacttcgaat
tcgactcggaatggcacttctgctgcaacttcaaatgggactggtactggcgctggtact
ggcgcaagtcatcgttctagtcctgtaaccaatcgccagactaacaatactagtgctctt
tcgaattcgaatgcacatatcatgtcatcgtttgaagaccaatatggacgtcttcctcca
ggttgggaacgccgtgctgactctctaggtcgcacttattatgttgatcataatacgcgc
actaccacctggactcgtccggctagcagtacaaatcctgtacataatacgtcgagtgat
agccaaagacttaatcatcagaacagacatttacctgatgactctaatccatctttaatg
caatcagattccggaaacgaccttcctttcggctgggaaatgcgatacacagatacaggc
cgcccatattttgttgaccataatacgcgaactaccacatgggttgatccacgaaatccc
cttgtgcgacctaatggtggctcttctactgtgggtagcttgatgcagccacagtcactt
tcgcatttgggtcccttacctagtggttgggaaatgcgtcttacaaatagtgcccgtgtc
tattttgttgatcacaatacgaaaacaaccacttgggacgatccacgtcttccttctgcc
ttggatcaagatgttcctcaatacaaatgcgattttcgtcgcaaacttatatatttccgt
tcacaacctggtatgcgtcctttacctggccaatgcaatgttaaggtacgcagagatcac
attttcgaagattcatatgcggagattatgcgttattctgctcatgacttgaaaaagaga
cttatgatacgttttgatggtgaagatggtctagattacggtggtttgtctagagagttt
ttcttcctcttatcacataaaatgtttgacccgatttattgcttatttgagtactccgct
gtcgacaattacactctgcagattaatcctcattctagcattaaccctgagcatctcaat
tatttccgtttcattgggcgtgttataggtttggcaatttttcatcgccgttttcttgac
gctttctttgttgtttctctctacaagaaattattacgtaaaaaggttagtctagctgac
atggaaagtatcgatgctgagttttatcgaagcttgaagtgggttttggaaaatgatatc
accggcattttggatttaacattcagcgttgaagaagaccattttggggaagttcgtact
gttgagcttataaccaatggtgaaaacattgaagtcactgaagaaaacaagaagaaatat
gttgatttggttactgaatggagagtttccaaacgtgttgagcaacaatttaatgcattt
tattctggttttgttgaactggtatcccctgatttagtgaatgttttcgacgaaagagaa
cttgaattgttaattggtggtatatccgatgttgatgttgaagactggaagagccacacc
gagtatcgcacttatattgctaccgatcctgttatcaagtggttttgggaaattattgct
ggctggaagaacgaagatcgttcaaagttattacagttcgctacaggcacatcacgcatt
cctgtcaatggttttagggatttgcaaggaagtgatggacctcgcaagtttactattgaa
aaggcaggtacaccggatcaacttccagtagcacacacatgtttcaatcgcttggattta
cctgattatccttcaaaagatacactgcatgaaaaattgagcctagccgttgaaaacacg
gtagggtttggaaacgagtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB-SPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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