KEGG   Schizosaccharomyces pombe (fission yeast): SPCC1753.01c
Entry
SPCC1753.01c      CDS       T00076                                 
Symbol
ssb2
Name
(RefSeq) single-stranded DNA-binding protein Ssb2
  KO
K10739  replication factor A2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030  DNA replication
spo03420  Nucleotide excision repair
spo03430  Mismatch repair
spo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPCC1753.01c (ssb2)
   03420 Nucleotide excision repair
    SPCC1753.01c (ssb2)
   03430 Mismatch repair
    SPCC1753.01c (ssb2)
   03440 Homologous recombination
    SPCC1753.01c (ssb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spo03032]
    SPCC1753.01c (ssb2)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPCC1753.01c (ssb2)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    SPCC1753.01c (ssb2)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     SPCC1753.01c (ssb2)
   MMR (mismatch excision repair)
     SPCC1753.01c (ssb2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     SPCC1753.01c (ssb2)
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 UPF0147
Other DBs
NCBI-GeneID: 2538781
NCBI-ProteinID: NP_588227
PomBase: SPCC1753.01c
Ensembl: SPCC1753.01c
UniProt: Q92373
Position
III:complement(1538390..1542108)
AA seq 279 aa
MAYDAFGKPGYGPDFNSAFSPGMGGGAGFNEYDQSSQPSVDRQQGAGNKLRPVTIKQILN
ASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHWEHIDALSE
LATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGA
NAPGYGTSNALGYNNISSNGAANSLEQKLAEYSLTPAQMTVMQAIHSAPETNEGVHVRQL
AQSVGPGIDLTAVTDFLQQEGIIYTTIDENHFKSVLQDQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atggcttatgatgcttttggcaagccgggctatggtcccgacttcaatagcgctttttct
ccaggaatgggaggaggcgctggatttaatgaatatgatcaatcgagccagcccagcgtc
gatagacaacaaggagctggaaataaattacgtcctgttaccattaagcaaattctcaat
gcctctcaagttcacgctgatgcagaattcaagatagatggcgttgaagtcggacaggtt
acttttgtaggagttttacggaacattcacgctcaaactacaaacacaacatatcaaata
gaagatggaacaggaatgattgaagtaaggcattgggaacacattgatgcgctatctgaa
cttgctacagacacctatgttcgtgtgtatggaaacatcaaaatattttctggaaaaatt
tacattgcttctcaatacatccgtacaattaaagaccataatgaagtccattttcatttc
cttgaagcaattgctgtacacctacatttcactcagaaagcaaatgctgtgaacggagcc
aacgctccaggctacggaacttccaacgcactaggctacaataacatttcttcaaatggt
gctgccaactctctggaacaaaaactagctgaatattcactaacccccgcacaaatgacc
gttatgcaagctatccatagtgcaccagagacgaatgaaggtgttcacgttagacaactt
gctcaaagcgtgggtcccggtatagaccttacggcggttactgattttcttcaacaagaa
ggaatcatctacacaacaattgatgaaaatcattttaaaagtgttttacaagaccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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