KEGG   Spongiibacter sp. IMCC21906: IMCC21906_00866
Entry
IMCC21906_00866   CDS       T03945                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
spoi  Spongiibacter sp. IMCC21906
Pathway
spoi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spoi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IMCC21906_00866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spoi03019]
    IMCC21906_00866
Enzymes [BR:spoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     IMCC21906_00866
Messenger RNA biogenesis [BR:spoi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     IMCC21906_00866
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AKH68557
UniProt: A0A0F7M2J7
Position
complement(917802..919193)
AA seq 463 aa
MTSSSVAGLWKKLTKKLPKSNRRTAAREPVIIPRDHHNISRRLISDSALKVMHRLNQSGY
DAYLVGGGVRDILLGGQPKDFDVATDATPEQVRGLFRNSRIIGRRFKIVHVRFGREVIEV
TTFRGNHSDTGGTVSKQHSARNESGMLLRDNIYGSVTEDAERRDLTINALYYTSKDFCVY
DYMGGLQDLNDKLIRVIGDPETRYREDPVRMMRVIRFAAKLNFDIEAATEEPIQRLAPLL
RDISPARLFDEVLKLFMAGNGLQTYALLQRYGLFQPLFPATQTMLNKQTPAAEAIIQQGL
INTDARIAEGKSVTPAFIYAVILWPLVKSLQAEIAASGVPEIPALHQASERVLHKQQQTV
AIPKRFSLPMRDIWELQFRLTKRNGKRAEQLLEHRYFRAGFDFLLLREQAEEIEPELGQW
WLAFQESRPELRDAMLKTSSSQEPRKRPRRRRRRPPNAARNPE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgacatctagctccgttgccgggctgtggaaaaagctcaccaagaaactccccaaatcc
aataggcgcactgccgcaagggagcccgtgataatccccagggatcatcacaacatatcc
cgtcgacttattagcgatagcgcgctaaaagtcatgcaccggctgaaccagtctggctat
gacgcctaccttgttggcggcggcgtgagagacattttgctcggcggccaacccaaagac
ttcgacgtcgccaccgatgccacccccgagcaagtgcgcggcctgtttcgcaacagccgc
atcattggcaggcgcttcaagattgtccatgtgcgttttggcagagaagtgatagaggtc
accactttccgaggtaatcatagcgacaccggcggaacagtcagcaagcaacattctgct
cgcaacgaaagtggaatgctgctgcgagacaatatctatggttcggttactgaagacgct
gagcgcagagacctcaccattaacgccctgtactacaccagcaaagacttttgtgtgtac
gattatatgggcggcctgcaagacctgaacgataaacttatccgggttattggcgacccc
gaaactcgttaccgcgaagacccagtaagaatgatgcgggttatacgttttgcggcaaaa
ctgaattttgatattgaagccgctaccgaagaaccaattcaacgactggcaccgctgctc
agagacatctcccccgcgagattatttgacgaagtcttgaaattatttatggctgggaat
ggcctgcaaacctatgccttattacagcgctatggtttatttcaacccttgtttcctgcc
acccagaccatgttaaacaagcaaacccccgcggcagaagccattatccaacagggcttg
attaacaccgatgcgcgaattgccgaaggcaaatccgtcaccccggcttttatttacgcc
gtgatcctttggcccttggtgaaatcactgcaagctgaaatcgccgcttctggtgtgccc
gaaatccctgcactgcatcaagcctctgagcgcgttctgcacaagcaacaacaaactgtg
gcgattcccaagcggttttccctgccaatgcgcgacatttgggaactgcagttccggctc
accaaacgcaacggcaaacgcgcagaacaactactggagcaccgttactttcgcgctggt
tttgatttccttctgctaagagaacaggccgaagagattgaacccgaactcgggcaatgg
tggctggcttttcaggaaagccgtcccgaattacgcgacgctatgctcaaaaccagcagc
agccaagaaccgcgaaaacgtcctcgcagacgccgtcgcagaccacccaatgcggcccgc
aacccggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system