KEGG T00060: spr0057

Streptococcus pneumoniae R6 (avirulent): spr0057

Entry

spr0057 CDS T00060

Gene name

strH

Definition

beta-N-acetylhexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

spr Streptococcus pneumoniae R6 (avirulent)

Pathway

spr00511	Other glycan degradation
spr00520	Amino sugar and nucleotide sugar metabolism
spr01100	Metabolic pathways
spr01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:spr00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:spr00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 G5 YSIRK_signal Gram_pos_anchor SPOUT_MTase Baculo_PEP_C

Other DBs

NCBI-GI:

15902101

NCBI-GeneID:

933411

UniProt:

Q8DRL6

Structure

PDB:

3RPM

Position

complement(60528..64466)

AA seq 1312 aa
MKHEKQQRFSIRKYAVGAASVLIGFAFQAQTVAADGVTPTTTENQPTIHTVSDSPQSSEN
RTEETPKAELQPEAPKTVETETPATDKVASLPKTEEKPQEEVSSTPSDKAEVVTPTSAEK
ETANKKEEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATV
NEKLAKKKIVSIDAGRKYFSPEQLKEIIDKAKHYGYTDLHLLVGNDGLRFMLDDMSITAN
GKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQMTDLINYAKDKGIGLIPTVNSPGHMDA
ILNAMKELGIQNPNFSYFGKKSARTVDLDNEQAVAFTKALIDKYAAYFAKKTEIFNIGLD
EYANDATDAKGWSVLQADKYYPNEGYPVKGYEKFIAYANDLARIVKSHGLKPMAFNDGIY
YNSDTSFGSFDKDIIVSMWTGGWGGYDVASSKLLAEKGHQILNTNDAWCYVLGRNADGQG
WYNLDQGLNGIKNTPITSVPKTEGADIPIIGGMVAAWADTPSARYSPSHLFKLMRHFANA
NAEYFAADYESAEQALNEVPKDLNRYTAESVAAVKEAEKAIRSLDSNLSRAQQDTIDQAI
AKLQETVNNLTLTPEAQKEEEAKREVEKLAKNKVISIDAGRKYFTLDQLKRIVDKASELG
YSDVHLLLGNDGLRFLLNDMTITANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEVT
ELIEYAKSKDIGLIPAINSPGHMDAMLVAMEKLGIKNPQAHFDKVSKTTMDLKNEEAMNF
VKALIGKYMDFFAGKTKIFNFGTDEYANDATSAQGWYYLKWYQLYGKFAEYANTLAAMAK
ERGLQPMAFNDGFYYEDKDDVQFDKDVLISYWSKGWWGYNLASPQYLASKGYKFLNTNGD
WYYVIGNHKQDEAYPLSKAVENSGKVPFNQLASTKYPEVDLPTVGSMLSIWADRPSAEYK
EEEIFELMTAFADHNKDYFRANYNALREELAKIPTNLEGYSKESLEALDAAKTALNYNLN
RNKQAELDTLVANLKAALQGLKPAATHSGSLDENEVAANVETRPELITRTEEIPFEVIKK
ENPNLPAGQENIITAGVKGERTHYISVLTENGKTTETVLDSQVTKEVINQVVEVGSPVTH
KGDESGLAPTTEVKPRLDIQEEEIPFTTVTRENPLLLKGKTQVITKGVNGHRSNFYSVST
SADGKEVKTLVNSVVAQEAVTQIVEVGTMVTHVGDENGQAAIAEEKPKLEIPSQPAPSTA
PAEESKALPQDPAPVVTEKKLPETGTHDSAELVVAGLMSTLAAYGLTKRKED

NT seq 3939 nt +upstreamnt +downstreamnt
atgaaacatgaaaaacaacagcgtttttctattcgtaaatacgctgtaggagcagcttct
gttctaattggatttgccttccaagcacagactgttgcagccgatggagttactcctact
actacagaaaaccaaccgaccatccatacggtttctgattcccctcaatcatccgaaaat
cggactgaggaaacacctaaagcagagcttcaaccagaagctccaaaaactgtagaaaca
gaaactccagctactgataaggtagctagtcttccaaaaacagaagaaaaaccacaagag
gaagttagttcaactcctagtgataaagcagaggtggtaactccaacttctgctgaaaaa
gaaactgctaataaaaaggaagaagaagctagccctaaaaaggaagaagcgaaagaggtt
gattctaaagagtcaaatacagacaagactgacaaggataaaccagctaaaaaagatgaa
gcgaaagcagaggctgacaaaccggaaacagagacaggaaaggaacgtgctgcaactgta
aatgaaaaactagcgaaaaagaaaattgtttctattgatgctggacgtaaatatttctca
ccagaacagctcaaggaaatcatcgataaagcgaaacattatggctacactgatttacac
ctattagtcggaaatgatggactccgtttcatgttggacgatatgagcatcacagctaac
ggcaagacctatgccagtgacgatgtcaaacgcgccattgaaaaaggtacaaatgattat
tacaacgatccaaacggcaatcacttaacagaaagtcaaatgacagatctgattaactat
gccaaagataaaggtatcggtctcattccgacagtaaatagtcctggacacatggatgcg
attctcaatgccatgaaagaattgggaatccaaaaccctaactttagctattttgggaag
aaatcagcccgtactgtcgatcttgacaacgaacaagctgtcgcttttacaaaagccctt
atcgacaagtatgctgcttatttcgcgaaaaagactgaaatcttcaacatcggacttgat
gaatatgccaatgatgcgacagatgctaaaggttggagtgtgcttcaagctgataaatac
tatccaaacgaaggctaccctgtaaaaggctatgaaaaatttattgcctacgccaatgac
ctcgctcgtattgtaaaatcgcacggtctcaaaccaatggcctttaacgacggtatctac
tacaatagcgacacaagctttggtagttttgacaaagacatcatcgtttctatgtggact
ggtggttggggaggctacgatgtcgcttcttctaaactactagctgaaaaaggtcaccaa
atccttaataccaatgatgcttggtgctacgttcttggacgaaacgctgatggccaaggc
tggtacaatctcgatcaggggctcaatggtattaaaaacacaccaatcacttctgtacca
aaaacagaaggagctgatatcccaatcatcggtggtatggtagctgcttgggctgacact
ccatctgcacgttattcaccatcacacctcttcaaactcatgcgtcattttgcaaatgcc
aacgctgaatacttcgcagctgattatgaatctgcagagcaagcacttaacgaggtacca
aaagacctgaaccgttatactgcagaaagcgtcgcggccgtaaaagaagctgaaaaagct
attcgctctctcgatagcaaccttagccgtgcccaacaagatacgattgatcaagccatt
gctaaacttcaagaaactgtcaacaacttgaccctcacgcctgaagctcaaaaagaagaa
gaagctaaacgtgaggttgaaaaacttgccaaaaacaaggtaatctcaatcgatgctgga
cgcaaatactttactctggaccagctcaaacgcatcgtagacaaggccagtgagctcgga
tattctgatgtccatctccttctaggaaatgacggacttcgctttctactcaatgatatg
accattactgccaacggaaaaacctatgctagtgatgacgttaaaaaagctattatcgaa
ggaactaaagcttactacgacgatccaaacggtactgcactaacacaggcagaagtgaca
gagctaattgaatacgctaaatctaaggacattggtctcatcccagctattaacagtcca
ggtcacatggatgctatgctggttgccatggaaaaattaggtattaaaaatcctcaagcc
cactttgataaagtttcaaaaacaactatggacttgaaaaacgaagaagcgatgaacttt
gtaaaagccctcatcggtaaatacatggacttctttgcaggtaaaacaaagattttcaac
tttggtactgacgaatacgccaacgatgcgactagtgcccaaggctggtactacctcaag
tggtatcaactctatggcaaatttgccgaatatgccaacaccctcgcagctatggccaaa
gaaagagggcttcaaccaatggccttcaacgatggcttctactatgaagacaaggacgat
gttcagtttgacaaagatgtcttgatttcttactggtctaaaggctggtggggatataac
ctcgcatcacctcaatacctagcaagcaaaggctataaattcttgaataccaacggtgac
tggtattatgttataggcaatcacaaacaagatgaagcttaccctctttcaaaagcagtt
gaaaattctggtaaagttccattcaatcaactagcttctaccaaatatcctgaagtagat
cttccaacagtcggaagtatgctttcaatctgggcagatagaccaagcgctgagtacaag
gaagaggaaatctttgaactcatgactgcctttgcagaccacaacaaagactacttccgt
gctaattataatgctctccgcgaagaattagctaaaattcctacaaacttagaaggatat
agtaaagaaagtcttgaggcccttgacgcagctaaaacagctctaaattacaacctcaac
cgtaataaacaagctgagcttgacacacttgtagccaacctaaaagccgctcttcaaggc
ctcaaaccagctgcaactcattcaggaagcctagatgaaaatgaagtggctgccaatgtt
gaaaccagaccagaactcatcacaagaactgaagaaattccatttgaagttatcaagaaa
gaaaatcctaacctcccagctggtcaggaaaatattatcacagcaggagtcaaaggtgaa
cgaactcattacatctctgtactcactgaaaatggaaaaacaacagaaacagtccttgat
agccaggtaaccaaagaagttataaaccaagtggttgaagttggctctcctgtaactcac
aagggtgatgaaagtggtcttgcaccaactactgaggtaaaacctagactggatatccaa
gaagaagaaattccatttaccacagtgactcgtgaaaatccactcttactcaaaggaaaa
acacaagtcattactaagggcgtcaatggacatcgtagcaacttctactctgtgagcact
tctgccgatggtaaggaagtgaaaacacttgtaaatagtgtcgtagcacaggaagccgtt
actcaaatagtcgaagtcggaactatggtaacacatgtaggcgatgaaaacggacaagcc
gctattgctgaagaaaaaccaaaactagaaatcccaagccaaccagctccatcaactgct
cctgctgaggaaagcaaagctcttcctcaagatccagctcctgtggtaacagagaaaaaa
cttcctgaaacaggaactcacgattctgcagaactagtagtcgcaggactcatgtccaca
ctagcagcctatggactcactaaaagaaaagaagactaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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