KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr0164
Entry
spr0164           CDS       T00060                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthese; a deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr00740  Riboflavin metabolism
spr01100  Metabolic pathways
spr01110  Biosynthesis of secondary metabolites
spr01240  Biosynthesis of cofactors
spr02024  Quorum sensing
Module
spr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:spr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    spr0164 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    spr0164 (ribD)
Enzymes [BR:spr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     spr0164 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     spr0164 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Helicase_IV_N Tmem26
Other DBs
NCBI-ProteinID: AAK98968
UniProt: Q8DRE9
Position
complement(172659..173759)
AA seq 366 aa
MSDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGGPHAERNALKNCR
ESPVGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEENNL
QVTVGILENECLNLIKSFRKYITQHVPYVFMKYAMSMDGKIATKTNQSKWITEEEARKHV
HQLRHYVSAIMVGVNTVIQDDPLLTCRLEEGKNPIRIICDTHLRTPLTSKIVKTANDIKT
YIATSSEDKNKMKLYQNHGCEILSIKKKGNHIDLSSLMQHLGNMQIDSLVLEGGSLMNWS
ALEQQIVDELKIYIAPKIFGGSAKFPVGGEGISLPNDAIRLKPYAFSQIGNDYLIESEVI
YPCSQE
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgagcgattcaaaatatatgaaattagcaataaaactggcacaaaaaggggctggttac
gtcaaccccaatcctatggtcggcgcagttattgtaaaagataatcacatcatcggacaa
ggttatcatgagttttttggtggcccacatgctgagagaaatgctcttaaaaactgtaga
gaatcccctgtcggagcgacgctttatgtaacacttgaaccctgttgtcacttcgggaaa
acacctccctgtatagatgctataatcgatagtggtattacaagagtagtcattggaagc
ctagactgtaatcctattgtatctggaaaaggagtaaagatacttgaggaaaataatctt
caagttactgttggaattttagaaaatgagtgtcttaacttaataaaaagttttagaaag
tatattacccagcatgtaccctatgtttttatgaaatatgcaatgtcaatggatggaaaa
atagccactaaaacaaatcaatccaaatggattactgaagaagaagcaagaaagcatgtg
catcagttacgacactatgttagtgcaattatggtgggagtcaatactgttattcaagac
gatcctttgctgacatgtagattggaggaagggaaaaatcctatccgtatcatatgcgat
acacatttacgaactcctcttacctctaaaatcgtaaaaacagcaaatgatattaaaact
tacattgccacttcctctgaagacaaaaataaaatgaagctatatcaaaatcatggctgt
gaaatactttccataaagaaaaaaggcaatcatatagacttatcgagtttaatgcaacat
ctaggaaacatgcagattgatagcctagttctagaagggggcagtctaatgaattggagt
gctttggaacaacaaattgttgatgagctgaaaatatatattgcaccaaaaatttttgga
ggcagtgccaagtttcctgtcggaggtgaaggcatttctttgccaaatgacgctattaga
ttgaaaccttatgctttttctcaaataggaaatgactatctcatagaaagtgaagtgatt
tatccatgttcacaggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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