KEGG S.pneumoniae_R6: spr0440

Streptococcus pneumoniae R6 (avirulent): spr0440

Entry

spr0440 CDS S.pneumoniae_R6

Definition endo-beta-N-acetylglucosaminidase, putative

Class

SSDB

Motif Pfam: Glyco_hydro_85 Big_3 G5 YSIRK_signal FIVAR Gram_pos_anchor
Peptidase_C6
PROSITE: GRAM_POS_ANCHORING G5

Other DBs NCBI-GI: 15902484
NCBI-GeneID: 934776
UniProt: Q8CZ52

Structure

PDB: 2W91 2W92 3GDB

Position 441113..446092

AA seq 1659 aa
MKNPFFERRCRYSIRKLSVGACSLMIGAVLFAGPALAEETAVPENSGANTELVSGESEHS
TNEADKQNEGEHARENKLEKAEGVATASETASPASNEAATTETAEAASAAKPEEKASEVV
AETPSAEAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEVQPDVPKNTEKTLKPKEIK
FNSWEELLKWEPGAREDDAINRGSVVLASRRTGHLVNEKASKEAKVQALSNTNSKAKDHA
SVGGEEFKAYAFDYWQYLDSMVFWEGLVPTPDVIDAGHRNGVPVYGTLFFNWSNSIADQE
RFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQETTGDLVKPLGEKMRQFMLYSKEY
AAKVNHPIKYSWYDAMTYNYGRYHQDGLGEYNYQFMQPEGDKVPADNFFANFNWDKAKND
YTIATANWIGRNPYDVFAGLELQQGGSYKTKVKWNDILDENGKLRLSLGLFAPDTITSLG
KTGEDYHKNEDIFFTGYQGDPTGQKPGDKDWYGIANLVADRTPAVGNTFTTSFNTGHGKK
WFVDGKVSKDSEWNYRSVSGVLPTWRWWQTSTGEKLRAEYDFTDAYNGGNSLKFSGDVAG
KTDQDVRLYSTKLEVTEKTKLRVAHKGGKGSKVYMAFSTTPDYKFDDADAWKELTLSDNW
TNEEFDLSSLAGKTIYAVKLFFEHEGAVKDYQFNLGQLTISDNHQEPQSPTSFSVVKQSL
KNAQEAEAVVQFKGNKDADFYEVYEKDGDSWKLLTGSSSTTIYLPKVSRSASAQGTTQEL
KVVAVGKNGVRSEAATTTFDWGMTVKDTSLPKPLAENIVPGATVIDSTFPKTEGGEGIEG
MLNGTITSLSDKWSSAQLSGSVDIRLTKSRTVVRWVMDHAGAGGESVNDGLMNTKDFDLY
YKDADGEWKLAKEVRGNKAHVTDITLDKPITAQDWRLNVVTSDNGTPWKAIRIYNWKMYE
KLDTESVNIPMAKAAARSLGNNKVQVGFADVPAGATITVYDNPNSQTPLATLKSEVGGDL
ASAPLDLTNQSGLLYYRTQLPGKEISNVLAVSVPKDDRRIKSVSLETGPKKTSYAEGEDL
DLRGGVLRVQYEGGTEDELIRLTHAGVSVSGFDTHHKGEQNLTLQYLGQPVNANLSVTVT
GQDEASPKTILGIEVSQEPKKDYLVGDSLDLSEGRFAVAYSNDTMEEHSFTDEGVEISGY
DAQKTGRQTLTLRYQGHEVNFDVLVSPKAALNDEYLKQKLAEVEAAKNKVVYNFASPEVK
EAFLKAIEAAEQVLKDHETSTQDQVNDRLNKLTEAHKALNGQEKFTEEKTELDRLTGEAQ
ELLAAKPNHPSGSALAPLLEKNKALVEKVDLSPEELATAKQSLKDLVALLKEDKSAVFSD
SKTGVEVHFSNKEKTVIKGLKVERVQASAEEKKYFAGEDAHVFEIEGLDEKGQDVDLSYA
SIVKIPIEKDKKVKKVFFLPEGKGAVELAFEQTDSHVIFTAPHFTHYAFVYESAEKPQPA
KPAPQNKVLPKPTYQPASDQQKAPKLEVQEEKVAFHRQEHENTEMLVGEQRVIIQGRDGL
LRHVFEVDEKGQRRLRSTEVIQEAIPEIVEIGTKVKTVPAVVATQEKPAQNTAVKSEEAS
KQLPNTGTADANEALIAGLASLGLASLALTLRRKREDKD

NT seq 4980 nt +upstreamnt +downstreamnt
atgaagaatccattttttgaaagacgttgtcgttacagtattcgtaagttatcagtagga
gcctgctcgctgatgattggtgctgttttatttgctggtccagccttggctgaagaaact
gcagttcctgaaaatagcggagctaatacagagcttgtttcaggagagagtgagcattcg
accaatgaagctgataagcagaatgaaggggaacatgctagagaaaacaagctagaaaag
gcagaaggagtagcgacagcatctgaaactgcttcgccagcaagcaatgaagctgcaact
actgaaactgcagaagcagctagcgcagctaaaccagaggaaaaagcaagtgaggtggtt
gcagaaacaccatctgcagaagcaaaacctaagtctgacaaggaaacagaagcaaagccc
gaagcaactaaccaaggggatgagtctaagccagcagccgaagctaataagactgaaaaa
gaagtccagccagatgtccctaaaaatacagaaaaaacattaaaaccaaaggaaatcaaa
tttaattcttgggaagaattgttaaaatgggaaccaggtgctcgtgaagatgatgctatt
aaccgtggatctgttgtcctcgcttcacgtcggacaggtcatttagtcaatgaaaaagct
agcaaggaagcaaaagttcaagccttatcaaacaccaattctaaagccaaagaccatgct
tctgttggtggagaagagttcaaggcctatgcttttgactattggcaatatctagattca
atggtcttctgggaaggtctcgtaccaactcctgacgttattgatgcaggtcaccgtaac
ggggttcctgtatacggtacactcttcttcaactggtctaatagtattgcagatcaagaa
agatttgctgaagctttgaagcaagacgcagatggtagcttcccaattgcccgtaaattg
gtagacatggccaagtattatggctatgatggctatttcatcaaccaagaaacaactgga
gatttggttaaacctcttggagaaaagatgcgccagtttatgctctatagcaaggaatat
gctgctaaggtaaaccatccaatcaagtattcttggtacgatgccatgacctataactat
ggacgttaccatcaagatggtttgggagaatacaactaccaattcatgcaaccagaagga
gataaggttccggcagataacttctttgctaactttaactgggataaggctaaaaatgat
tacactattgcaactgccaactggattggtcgtaatccttatgatgtatttgcaggtttg
gaattgcaacagggtggttcctacaagacaaaggttaagtggaatgacattttagacgaa
aatgggaaattgcgcctttctcttggtttatttgccccagataccattacaagtttagga
aaaactggtgaagattatcataaaaatgaagatatcttctttacaggttatcaaggagac
cctactggccaaaaaccaggtgacaaagattggtatggtattgctaacctagttgcggac
cgtacgccagcggtaggtaatacttttactacttcttttaatacaggtcatggtaaaaaa
tggttcgtagatggtaaggtttctaaggattctgagtggaattatcgttcagtatcaggt
gttcttccaacatggcgctggtggcagacttcaacaggggaaaaacttcgtgcagaatat
gattttacagatgcctataatggcggaaattcccttaaattctctggtgatgtagccggt
aagacagatcaggatgtgagactttattctactaagttagaagtaactgagaagaccaaa
cttcgtgttgcccacaagggaggaaaaggttctaaagtttatatggcattctctacaact
ccagactacaaattcgatgatgcagatgcatggaaagagctaaccctttctgacaactgg
acaaatgaagaatttgatctcagctcactagcaggtaaaaccatctatgcagtcaaacta
tttttcgagcatgaaggtgctgtaaaagattatcagttcaacctaggacaattaactatc
tcggacaatcaccaagagccacaatcgccgacaagcttttctgtagtgaaacaatctctt
aaaaatgcccaagaagcggaagcagttgtgcaatttaaaggcaacaaggatgcagatttc
tatgaagtttatgaaaaagatggagacagctggaaattactaactggctcatcttctaca
actatttatctaccaaaagttagccgctcagcaagtgctcagggtacaactcaagaactg
aaggttgtagcagtcggtaaaaatggagttcgttcagaagctgcaaccacaacctttgat
tggggtatgactgtaaaagataccagcctaccaaaaccactagctgaaaatatcgttcca
ggtgcaacagttattgatagtactttccctaagactgaaggtggagaaggtattgaaggt
atgttgaacggtaccattactagcttgtcagataaatggtcttcagctcagttgagtggt
agtgtggatattcgtttgaccaagtcacgtaccgttgttagatgggtcatggatcatgca
ggagctggtggtgagtctgttaacgatggcttgatgaacactaaagactttgacctttat
tataaagatgcagatggtgagtggaagctagctaaggaagtccgtggtaacaaagcacac
gtgacagatatcactcttgataaaccaatcactgctcaggactggcgcttgaatgttgtc
acttctgacaatggaactccatggaaggctattcgtatctataactggaaaatgtatgaa
aagcttgatactgagagtgtcaatattccgatggccaaggctgcagcccgttctctaggc
aataacaaggtacaagttggctttgcagatgtaccggctggagcaactattaccgtttat
gataatccaaattctcaaactccgctcgcaaccttgaagagcgaagttggaggagaccta
gcaagtgcaccattggatttgacaaatcaatctggtcttctttattatcgtacccagttg
ccaggcaaggaaattagtaatgtcctagcagtttccgttccaaaagatgacagaagaatc
aagtcagtcagcctagaaacaggacctaagaaaacaagctacgccgaaggggaggatttg
gaccttagaggtggtgttcttcgagttcagtatgaaggaggaactgaggacgaactcatt
cgcctaactcacgcaggtgtatcagtatcaggttttgatacgcatcataagggagaacag
aatcttactctccaatatttgggacaaccagtaaatgctaatttgtcagtgactgtcact
ggccaagatgaagcaagtccgaaaactattttgggaattgaagtaagtcaggaaccgaaa
aaagattacctagttggtgatagcttagacttgtctgaaggacgctttgcagtggcttat
agcaatgacaccatggaagaacattcctttactgatgagggagttgaaatttctggttac
gatgctcaaaagactggtcgtcaaaccttgacgcttcgttaccaaggtcatgaagtcaac
tttgatgttttggtatctccaaaagcagcattgaacgatgagtacctcaaacaaaaatta
gcagaagttgaagctgctaagaacaaggtggtctataactttgcttcaccagaagtaaaa
gaagccttcttgaaagcaattgaagcggccgaacaagtgttgaaagaccatgaaactagc
acccaagatcaagtcaatgaccgacttaataaattgacagaagctcataaagctctgaat
ggtcaagagaaatttacggaagaaaagacagagcttgatcgcttaacaggtgaggctcaa
gaactcttggctgccaaaccaaaccatccttcaggttctgccctagctccgcttcttgag
aaaaacaaggccttggttgaaaaagtagatttgagtccagaagagcttgcaacagcgaaa
cagagtctaaaagatctggttgctttattgaaagaagacaagtcagcagtcttttctgat
agtaaaacaggtgttgaagtacacttctcaaataaagagaagactgtcatcaagggtttg
aaagtagagcgtgttcaagcaagtgctgaagagaagaaatactttgctggagaagatgct
catgtctttgaaatagaaggtttggatgaaaaaggtcaagatgttgatctctcttacgct
tctattgtgaaaatcccaattgaaaaagataagaaagttaagaaagtatttttcttacct
gaaggcaaaggggcagtagaattggcttttgaacaaacggatagtcatgttatctttaca
gcaccacactttactcattatgcctttgtttatgaatctgctgaaaaaccacaacctgct
aaaccagcaccacaaaacaaagtccttccaaaacctacttatcaaccggcttctgatcaa
caaaaggctcctaaattggaagttcaagaggaaaaggttgcctttcatcgtcaagagcat
gaaaatactgagatgctagttggggaacaacgagtcatcatacagggacgagatggactg
ttaagacatgtctttgaagttgatgaaaagggtcagcgtcgtcttcgttcaacagaagtc
atccaagaagcgattccagaaattgttgaaattggaacaaaagtaaaaacagtaccagca
gtagtagctacacaggaaaaaccagctcaaaatacagcagttaaatcagaagaagcaagc
aaacaattgccaaatacaggaacagctgatgctaatgaagccctaatagcaggcttagcc
agccttggtcttgctagtttagccttgaccttgagacggaaaagagaagataaagattaa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (20)

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