KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr0537
Entry
spr0537           CDS       T00060                                 
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease, 5'-3'
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03410  Base excision repair
spr03430  Mismatch repair
spr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    spr0537 (recJ)
   03430 Mismatch repair
    spr0537 (recJ)
   03440 Homologous recombination
    spr0537 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spr03400]
    spr0537 (recJ)
DNA repair and recombination proteins [BR:spr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     spr0537 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     spr0537 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      spr0537 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 YjeF_N AlaDh_PNT_C ThiG DSPc
Other DBs
NCBI-ProteinID: AAK99341
UniProt: Q8DQR4
Position
535289..537523
AA seq 744 aa
MDVFLITPTYEWQFALQVEDADFTKIAKKAGLGPEVARLLFERGIQDQESLKKFLEPSLE
DLHDAYLLHDMDKAVERIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYL
PNRFTDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIALAQSMGVDVIVTDHHSMPE
TLPDAYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLT
DENRILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNP
AIDLLTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGV
LGIVAGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAG
MTLEVEQLSDLSQVLEDYVREKGADAGGKNKLNLDEELDLEALSLETVKSFERLAPFGMD
NQKPIFYIKNFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELA
VKLSVNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFPGELPNLAASEAV
VVKNIPEDITQLKTIFQEQHFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDI
RYKLKDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQ
TVKDQEMMALGTVQEIYDFLMEKE
NT seq 2235 nt   +upstreamnt  +downstreamnt
gtggatgtctttttgataacacctacttatgaatggcagtttgccctgcaggtagaagat
gcggattttacaaagatagccaagaaggctggactgggtcctgaggtggctcggttattg
tttgagagagggattcaggaccaagaaagtctgaagaagtttttagaaccttccttggag
gacttacatgatgcttatctgctccatgatatggacaaggcagtggagcggattcgtcag
gctattgaagaaggggaaaatattctcgtttatggagactatgatgcggatggcatgact
tcggcttctattgtgaaggaaagtttggaacaacttggtgctgagtgccgagtttacctg
ccaaatcgttttaccgatggctatggccctaatgctagtgtttataaatactttatcgag
caagaaggaatttccttgattgtgacggtggacaatggggttgctggtcatgaggctatt
gcattggctcagtctatgggagtagatgtcattgtgacagaccatcattccatgcctgaa
accctgccagatgcttatgctattgtccatcctgaacatccagatgcggattatcctttt
aaatatttggctggttgtggagttgctttcaagttggcttgtgccctgttagaagaagtg
caagtggaattgcttgatttggtcgctattggaactattgcagatatggtgagtctgacg
gatgaaaatcgtatcttagttcaatatggtctggaaatgttgggtcatacccagcgcatt
ggtctgcaagaaatgctggacatggctgggattgctgccaacgaagtaacagaagaaacg
gttggtttccagattgctcctcgtttgaatgccttgggtcgcttggatgatcccaatcct
gccattgatttgttgactggatttgatgatgaggaagcgcatgagattgcccttatgatt
caccagaaaaacgaagagcgcaaggaaatcgttcagtctatctatgaagaagccaagacc
atggtggatcctgagaagaaggttcaggtcttggccaaggaaggctggaatcctggggtt
ctaggaatcgtggctggtcgtttattggaagaattgggacagacagtcattgttcttaat
atagaagacggtcgtgccaagggcagtgctcgtagtgtggaagcggtcgatatttttgaa
gctctggatccccatcgagacctcttcatcgcctttggaggtcatgcaggtgcagcgggt
atgacgctggaagttgagcaactctcagatttatctcaggttttggaagattatgttcgt
gaaaaaggtgcagatgctggtggcaagaataagttaaacctagatgaagagttggatttg
gaggcacttagcttggaaacggtcaaaagttttgaacgtttagctccttttggaatggat
aatcagaaacctattttttatatcaagaattttcaggtcgaaagtgctcgtactatgggg
gcaggtaatgcccatctaaagctgaaaatttccaagggtgaggcgagttttgaagtggta
gcctttggtcaaggcagatgggcgacagagttttctcaaaccaagaatctagagttagcg
gttaaattgtctgtcaaccaatggaatggccaaactgctctccagttgatgatggtggat
gcgcgagtggaaggtgttcaactttttaacattcgtggaaaaaatgcagtcttgccagaa
ggtgttccagtcttggattttcctggagaactgccaaatcttgcggctagtgaagctgtt
gtcgtaaaaaacattccagaggatattactcagctgaagaccatttttcaggaacagcat
ttctctgctgtctatttcaaaaatgatattgacaaggcttattatctgacaggttatggg
actagagatcagtttgccaaattgtacaagactatttaccagttcccagagtttgatatt
cgctacaagctgaaagatttggctgcatatcttaatattcaacaaatcttgctggtcaag
atgattcaagtatttgaagaactaggctttgtgacgataaaagatggtgtgatgacagtc
aataaagaggcgccaaagcgggagataggagaaagtcaaatttaccaaaatctcaaacaa
accgttaaagaccaagaaatgatggcgctgggtacggtgcaagaaatttatgattttttg
atggaaaaagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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