KEGG T04073: SPRI

Streptomyces pristinaespiralis: SPRI_2079

Entry

SPRI_2079         CDS       T04073

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

spri Streptomyces pristinaespiralis

Brite

KEGG Orthology (KO) [BR:spri00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spri03032]
    SPRI_2079
   03400 DNA repair and recombination proteins [BR:spri03400]
    SPRI_2079
Enzymes [BR:spri01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SPRI_2079
DNA replication proteins [BR:spri03032]
Prokaryotic type
  DNA Topoisomerases
   SPRI_2079
DNA repair and recombination proteins [BR:spri03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SPRI_2079

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim

Other DBs

NCBI-ProteinID:

ALC20385

UniProt:

A0A0M4DDH2

Position

complement(2439857..2441983)

AA seq 708 aa
MTAESSVPSTALLTADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLLHCLWEII
DNSVDEALGGHCDHIEVILHEDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGKF
GGGSYAASGGLHGVGASVVNALSARLDVEVDRGGATHMISFRRGVPGIFTESGPDAPFDP
ANGLRKGKRVPKARTGTRVRYWADRQIFLKDAKLSLETLHQRARQTAFLVPGLTIVVHDE
RGLTEAGGEGKSVETFRFDGGISEFCEYLAQDKPVCDVLRLTGQGTFKETVPVLDDRGHM
TPTEVTRELGVDIALRWGTGYDTNLKSFVNIIATPKGGTHVTGFERSVTKTMNEVLRSAK
MLRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVANVVAKELKAFL
TSTKRDAKAQARAVLEKAVAAARTRIAARQHKEAQRRKTALESSSLPAKLADCRSDDVER
SELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVSDMLKNAECGAIIQVIGAG
SGRTFDIDAARYGKIVLLVDADVDGAHIRCLLLTLFQRYMRPMVEAGRVFAAVPPLHRIE
LIQPKKGQDKYVYTYSDNELRQTLLEFQRKGVRFKDSIQRYKGLGEMDADQLAETTMDPR
HRTLRRINIGDLESSEQIFDLLMGNEVAPRKEFITSSAATLDRSRIDA

NT seq 2127 nt +upstreamnt +downstreamnt
gtgaccgccgaatcgtccgtgccgtccacagcactgctgacagcagaccgtgacggctcc
aactacaccgcgcggcacctgctcgtcctggaggggctcgaggcggttcgcaaacgacct
ggcatgtacatcggctcgaccgacagtcgcggcctcctgcactgcctctgggagatcatc
gacaactccgtcgacgaagcgctcggcggccactgcgaccacatcgaggtcatcctccat
gaggacggctccgtcgaggtccgggacaacggccgcggcatccccgtggacgtggagccc
aagaccgggctctccggggtcgaggtcgtgatgaccaagctgcacgccggcggaaagttc
ggcggcggctcctacgcggcctccggcggtctccacggcgtcggcgcctcggtggtgaac
gcgctctccgcccgcctcgacgtcgaggtcgaccgcggcggcgcgacccacatgatcagc
ttccggcgcggtgtgcccggcatcttcaccgagtccggccccgacgcccccttcgacccg
gcgaacggcctgcgcaagggcaagcgcgtaccgaaggccaggaccggcacccgcgtccgt
tactgggcggaccgccagatcttcctcaaggacgccaagctctccctggagacgctgcac
cagcgcgcacgccagaccgccttcctcgttcccggcctgaccatcgtcgtccacgacgag
cgcggcctgacggaggccggcggcgagggcaagagcgtggagaccttccgtttcgacggg
ggcatcagcgagttctgcgagtacctggcccaggacaagcccgtctgtgacgtgctgagg
ctcaccggccagggcacgttcaaggagaccgtccccgtcctcgacgaccgcggtcacatg
acgccgacggaggtcacccgcgagctcggcgtggacatcgccctgcgctggggtaccggt
tacgacaccaacctcaagtccttcgtcaacatcatcgccacccccaagggcggcacccat
gtgaccggtttcgaacgctccgtgaccaagacgatgaacgaggtgctgcgctcggccaag
atgctgcgcgtcgccgaggacgacatcgtcaaggacgacgcgctggagggcctcaccgcc
gtcgtgaccgtccgcctcgccgagccgcagttcgagggccagaccaaggaggtcctcggc
acctcggcggccaacaggatcgtcgccaacgtggtggccaaggagctcaaggccttcctg
acgtccaccaagcgggacgccaaggcgcaggcccgtgcggtgctggagaaggccgtggcg
gccgcccgtacgcggatcgcggcccgccagcacaaggaggcgcagcgcaggaagaccgcc
ctggagtcctcgtcgctgcccgccaagctcgccgactgccgcagcgacgacgtggaacgc
agcgagctcttcatcgtcgagggcgactcggcgctcggcaccgcgaagctcgctcgcaac
agcgagttccaggccctcctgccgatccgcggcaagattctcaacgtccagaagtcgtct
gtctccgacatgctgaagaacgccgagtgcggggcgatcatccaggtcataggggccggc
tcgggccggacgttcgacatcgacgccgcccgctacggcaagatcgtcctgctggtcgac
gccgatgtcgacggcgcccacatccgctgcctgctgctgacgctcttccagcgctacatg
cggcccatggtggaggccggccgggtgttcgccgccgtgccgccgctgcaccggatcgag
ctgatccagcccaagaagggccaggacaagtacgtctacacgtactcggacaacgagctg
cggcagacgctgctggagttccagcgcaagggcgtccgcttcaaggactccatccagcgc
tacaagggactcggtgagatggacgccgaccagctggcggagaccaccatggacccgcgc
caccggaccctgcgccggatcaacatcggcgacctggagtcctccgagcagatcttcgac
ctgctcatgggcaacgaggtcgctccccgtaaggagttcatcaccagctcggcggccacg
ctggaccgctcgcgcatcgacgcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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