KEGG   Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_01958
Entry
SULPSESMR1_01958  CDS       T04974                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
spse  Pseudosulfitobacter pseudonitzschiae
Pathway
spse03420  Nucleotide excision repair
spse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SULPSESMR1_01958 (uvrD)
   03430 Mismatch repair
    SULPSESMR1_01958 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spse03400]
    SULPSESMR1_01958 (uvrD)
Enzymes [BR:spse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SULPSESMR1_01958 (uvrD)
DNA repair and recombination proteins [BR:spse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SULPSESMR1_01958 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     SULPSESMR1_01958 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11
Other DBs
NCBI-ProteinID: ASM72765
UniProt: A0A221K1A3
Position
complement(1999460..2001898)
AA seq 812 aa
MCVPIYVGGMSNFDEMDAFEGASLSARAMAARPQPYLDGLNPAQRAAVEQMDGPVLMLAG
AGTGKTRALTARIVHLLMMGRARPNEVLAVTFTNKAAREMKNRVGQMLGQQIEGMPWLGT
FHAICVKLLRRHAELVGLKSNFTILDRDDQLRLLKQLVSASGIDDKRWPARQLAGVIDAW
KNRALTPDKIPAADAGAYNHKGVELYAQYQRRLIDLNATDFGDLLLHMVTIFQKHPDVLE
QYQRWFRYILVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFE
KDFPGAHVVRLEQNYRSTPHILAAASGVIAGNANRLGKELWTEETEGELVRLIGHWDGEE
EARWIGEEIEAAQRGTRGLRAMNLDEMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFY
ERLEIRDAMAYFRIVVSNDNDLAFERIVNTPKRGLGDKAQQTIQITARANGVNLVEGARL
AVEQGLIKGKGGTELRKLVEGIDRWSAMMRASGTRIMDDDDSVVDTETDTPPDYNHIELA
EIILDDSGYTAHWQNDKTPEAAGRLENLKELINQLHNFENLQGFLEHVSLIMDNEQEGEG
AKVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGVKGLEEERRLAYVGITRAEEV
CTISFVSNRFVFGQWQSALPSRFIDELPSDHVDVLTPPGLHGGNYGAAGMAGVKSRLHEA
AAEANVYNSPGWRRLQARSQDRSVSQPRETRNTTIDASAVSSFTVGERVFHQKFGYGAVV
GIEGDKLEIDFEKAGTKKVVSKFITGTDDIPF
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgtgcgttccgatttatgtaggggggatgagcaatttcgatgaaatggacgccttcgag
ggcgcttcgctgtccgcacgcgcgatggccgcgcgcccgcaaccctatctggacggtctg
aatccggcccaacgtgccgcagttgaacagatggacggccccgtgctgatgctggcgggg
gcaggcaccggcaagacccgcgcgctgaccgcgcgaatcgtgcatctgctgatgatgggt
cgtgcgcgccctaacgaagtgctggcggtgacctttaccaacaaggccgcgcgcgagatg
aagaaccgcgtgggccagatgctgggccagcagatcgaggggatgccctggctgggcacc
ttccacgcgatctgcgtcaagctgttgcggcggcatgcggaactggtggggttgaagtcg
aactttacgattctggacagagatgaccagctgcgcttgctgaaacaactggtcagcgcg
tcgggcatcgacgacaaacgctggcccgcgcggcaactggccggtgtcatcgatgcgtgg
aaaaaccgcgctctgacacccgacaagattccggcagcggatgcgggggcctataaccac
aaaggcgtagagctttatgcccaataccagcgtcgcctgatcgacctgaacgccaccgat
ttcggtgatctgctgttgcacatggtcacgatctttcaaaagcaccccgacgtgttggag
caataccagcgttggttccgctacatccttgtggacgaataccaagataccaacgtcgcc
caatacctgtggctgcggctgctggcaggtgggcacaaaaacatctgttgcgtgggtgac
gacgaccagtcgatctatggctggcgcggcgccgaggtgggcaatatcctgcggttcgaa
aaggattttccgggcgcgcatgttgtccggctggaacagaactaccgctcgaccccgcat
attctggccgccgcttccggcgtgatcgcaggtaatgcgaaccgtctgggcaaggaattg
tggacggaagagaccgaaggcgaactggtccgtctgatcggccattgggacggcgaggaa
gaggcccgctggatcggtgaagagatcgaggccgcacagcgcggcacacgcggtttgcgg
gcgatgaacctcgacgaaatggccatcctcgtgcgcgcctcgcaccagatgcgtgccttc
gaggatcggttcctgaccatcggtctgccctaccgcgtcatcggcggcccgcgtttctac
gagcgtttggagatccgcgacgcgatggcctatttccgcatcgtggtgtccaacgacaac
gacctcgcgttcgagcggatcgtgaacacccccaagcgcggactgggcgacaaggcacag
cagaccatccagatcaccgcgcgcgccaacggcgtcaacctggtcgaaggggcgcggctg
gcggtcgagcaggggttgatcaagggcaagggcgggaccgagctccgcaagctggtcgag
gggatcgaccgttggtctgccatgatgcgcgccagtggcacccggatcatggacgacgac
gacagcgtggtggacacggaaaccgacacgccgcccgactacaaccatatcgaactggcc
gaaatcatcctcgacgacagcggctataccgcccactggcagaacgacaagacgcccgaa
gcggcggggcgtctggaaaacctcaaggaactgatcaaccagctgcacaacttcgagaac
cttcaggggtttctggaacacgtcagcctgatcatggacaacgaacaagagggcgagggc
gccaaggtcagcataatgaccctgcacgcggccaaaggtcttgaattcccgatggtcttt
ctgccgggttgggaggacggtctgttcccctcgcaacgctcgatggacgaaagcggggtc
aagggactggaggaagagcgccgccttgcctatgtcggcatcacccgtgccgaagaagtc
tgcacaatttccttcgtgtccaaccggttcgtctttgggcaatggcaatcggcgctgccg
tcacggttcatcgacgaattgccatcggatcacgtggacgttctgaccccgccgggcctg
cacggtggcaactacggcgctgccggtatggcgggtgtcaaatcccgtctgcacgaggcc
gcagccgaggcgaacgtctataattcgcccggatggcggcggttgcaggcgcgcagccag
gaccggtcggtcagccagccacgcgaaacccgcaacaccacaatcgacgccagtgcggtc
agcagctttaccgtgggcgaacgggtattccatcaaaagttcggctatggcgcggtggtg
gggatcgagggcgacaagctggagatcgactttgaaaaggcgggaaccaagaaggtcgtg
tcgaaattcatcaccggcacggacgacattccgttttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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