KEGG   Shewanella psychrophila: Sps_01644
Entry
Sps_01644         CDS       T05063                                 
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
spsw  Shewanella psychrophila
Pathway
spsw02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Sps_01644
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spsw02000]
    Sps_01644
Enzymes [BR:spsw01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     Sps_01644
Transporters [BR:spsw02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Sps_01644
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N nSTAND3 APS_kinase AAA_22 AAA_29 AAA_24 DEAD AAA_16 ABC_ATPase RsgA_GTPase AAA_30 AAA_23 NB-ARC AAA_25
Other DBs
NCBI-ProteinID: AQS36809
UniProt: A0A1S6HMS8
Position
complement(1809084..1810904)
AA seq 606 aa
MTHSSNQEVWTVFKRLMGYIKPLKVVFGFAVLGLFMYAAVDATFIAVIKPFIDGGFGGQV
SQATSSPGVASIDLGTSEGFGASSDVLLMAPIVVVVLFSLRGLANFLSTYCISFMSARLI
LDMRQEVFEHYLTLPVSYIDRENSGNLISRVTYDTEQIARATGSALITIVRDSITVVGML
AIMFFYSWKLSLCILVIGPIIGLIISIVSKRFRKVSKRIQAAMGGVTAATEQMIKGHKNV
LAFGGQEAESERFALVNEQNRYQNMKLALTQSISQPLVMVIGSFALAFVLYAASFEGMQE
ELTAGTFATILGAMLAMLQPIKSLTRVNAEFQRGIAACTTVFELLDTKPEVDAGTYKVDR
VKGELSFNQVSFRYPNQEKLALSKVDFSVKQGQTIALVGRSGSGKSTIASLVTRFYTGLE
EGSIKLDGVNIDEFALKNLRSQVALVSQQVTLFNDTIGNNIAYAYPGEVTQEQIIEAATL
AHAMEFIELLPEGLDTQVGENGVLLSGGQRQRIAIARAILRNSPVLILDEATSALDTESE
KAIQLGLDNLRHNRTSIVIAHRLSTIESADHILVIDHGEVVERGDHQSLLAQDGVYANLY
KMQFSS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacacactcttcaaatcaagaagtctggactgtatttaagcgcctaatgggttatata
aaaccattgaaagtcgtgtttggcttcgcagtccttggcttattcatgtatgccgcagtc
gatgccaccttcatcgccgtgattaaaccctttatcgatggcggcttcggcggtcaggta
agtcaagccacttcatcaccgggtgtcgccagtattgatcttggcacaagtgaaggtttt
ggcgcatccagtgatgtattgctgatggctcccattgtggttgttgttctttttagcctg
cgtggattggctaatttcctgtctacttactgtatctctttcatgagtgcacgccttatt
ttggacatgcgtcaagaagtgttcgagcattacctcacccttccagtgagttatatagac
agagagaactcaggtaatctcatttcccgagtcacctatgataccgagcagatagcgcgt
gctacaggtagcgcgctgatcaccatagtcagagacagcattactgtggttggcatgctt
gctatcatgttcttctattcatggaagctatccctttgtattttggtcatcggccctatc
ataggtttaatcatctctatcgttagtaaacgttttcgcaaggtctctaaacgaatacaa
gccgcgatggggggggtgaccgcggcgactgagcaaatgattaaaggccataaaaatgtg
ttggcatttggcggacaggaagccgaatctgagcgtttcgctttggttaatgagcaaaat
cgataccaaaatatgaaactggctctgacgcaatccattagccaacctctggttatggtg
ataggttctttcgctctcgctttcgttctgtatgctgcgagtttcgaggggatgcaagag
gagctaacggcgggaacattcgccacgattctcggtgccatgctcgccatgctacagcca
attaagagtctgactcgtgtcaatgctgaatttcagcgaggtattgccgcttgtacaaca
gtgtttgaactcttagatactaaacccgaagtcgatgctggcacctataaagtcgatcgc
gtaaaaggtgagcttagttttaatcaggtgagctttcgctacccaaatcaagagaagctt
gcgctgagtaaagtcgacttttcagtcaaacagggccagaccatagccttagtcggacgg
tctggttcgggtaagtcgacgatagcgagtctagtgacccgtttctatactggtctcgaa
gagggaagtattaagctcgatggggtcaacatagatgaatttgctctcaagaatcttcgc
agtcaagttgcactggtttcgcagcaagtcacactgtttaacgataccataggtaataac
atcgcttacgcctacccgggggaagtgactcaagagcagattatagaggcggcaacgctg
gcacatgccatggagtttatcgagttactgcctgaagggctcgatacgcaagtgggggag
aatggtgtcttactctctggtggtcagagacaaagaatcgccattgctcgggctatcttg
cgtaattcacctgtactcatactcgatgaggcaacctcggcgctagataccgagtcagag
aaagccattcaacttggactggataacttgcgtcataaccgaacttcgatagtcattgct
catagactgtcgactattgaatctgcggatcacattttggtgatagatcacggtgaggta
gttgagcgtggcgatcatcaatctttgctcgctcaggatggcgtatacgctaacttgtat
aaaatgcagtttagcagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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