KEGG   Strongylocentrotus purpuratus (purple sea urchin): 580354
Entry
580354            CDS       T01019                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013  Nucleocytoplasmic transport
spu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    580354
   03015 mRNA surveillance pathway
    580354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    580354
   03041 Spliceosome [BR:spu03041]
    580354
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     580354
Spliceosome [BR:spu03041]
 Complex C
  Other components
   EJC/TREX
    580354
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N LbR_Ice_bind
Other DBs
NCBI-GeneID: 580354
NCBI-ProteinID: XP_030854358
Position
Unknown
AA seq 497 aa
MATVEGVNAFLAQRLEKAKENLEDVEQNIRKLTGGDSTERRVSVGDSRRLIVGEQRRISG
DQRRVSGDQRRLVSDQRRPLSDQRIERRLSGDQRRLSADQRGVSGDQRRVSMDAPGARGR
GGGLIVQRLSLMERLGAPPAKRPNLGNPFSRLGGRVGPRNRAPSDDEEEDLDHKPLVQSS
VVTTLTTLTPKTRQQTIKEGQKDKKSTDRNKRMFGHLLGTLQKFRDESDSKTDKDKRRKE
IEKKLDEKAVEEKKAVAEERKLLMRDRKDKQAELNRLEQLVELTQEHKEWDAHSAVLSNY
IRTRAKPSIFYKPAKWTLGTEKLFKESKQILSAAVEKRKAELEKEIAELEGKPTKEEEKK
EEDEDSKKDRRRSGEDRRKSGEDRRRSVEERRRRHSNQDEVKGKKDDRDSSHVREDREKH
GSDEKRRDRKRSRHEDDKEAKVSKPKDSAKIEEDQSSKDKEDESLKERTAETNPDHDEKK
EKRKMMMVRWKVSMKKR
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggctaccgtcgagggtgtgaacgctttcctagctcaaagactagaaaaagccaaggaa
aacctagaagatgtggagcaaaacattcgtaaactcaccggaggagattccaccgaaaga
agggtgtcagttggagattcaaggaggctcattgttggagagcagagaagaatatcaggt
gatcagaggagggtgtcgggtgatcagaggagacttgtaagtgaccaaaggagacctttg
agtgaccaaaggattgagaggagactctcaggtgaccagagaaggctttcagctgaccag
agaggcgtatccggtgaccaacgtagagtctccatggatgcaccaggagcacggggtaga
ggcggaggattgatcgtacagaggctttcactgatggagagacttggggcaccgcctgct
aagagacctaacctgggaaatccatttagcaggctaggaggacgagtgggaccaaggaac
cgagcccccagtgatgatgaggaagaggacctggatcacaagcctcttgttcaatcctct
gtggtaactaccctcacaacattgacacccaaaacccgtcaacagactatcaaagaagga
cagaaagacaagaagagtactgataggaacaagcgcatgtttggtcaccttttaggcacc
ctgcagaagttcagagatgagagtgattcaaagacagacaaggacaagcgcaggaaggag
attgagaagaaactggatgagaaagccgtagaagagaagaaagctgtggcagaagagagg
aaacttttaatgagggaccggaaagataagcaggcagagctcaatcgtctagaacagctc
gttgaactcacacaggagcacaaggaatgggatgctcactctgccgtgctaagtaactac
atccgcaccagagccaaaccttccatcttctacaagcctgccaaatggactctgggtaca
gagaaactcttcaaagagtctaagcagatactgagtgctgctgtagagaagcgtaaagcc
gagctggagaaagagatagccgagttagaagggaagcccaccaaagaagaggagaagaaa
gaagaagatgaagactctaagaaggacaggagaaggagcggagaggacagaaggaagagc
ggtgaggacagaagacggagcgtggaggagagaagacgtcgccatagtaaccaagatgag
gtaaagggtaagaaggatgatagggatagctcacatgttagggaagatcgtgagaagcat
ggcagtgatgaaaagcgaagagacagaaaaaggtctaggcatgaagatgacaaagaagca
aaagtttccaaaccgaaagactctgctaagattgaagaggatcagtcttctaaagataaa
gaagatgaatccttgaaagagagaactgctgaaacaaaccctgatcacgatgaaaagaag
gagaaaaggaagatgatgatggtaagatggaaggtaagtatgaagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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