KEGG   Strongylocentrotus purpuratus (purple sea urchin): 580502
Entry
580502            CDS       T01019                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
  KO
K14571  ribosome biogenesis ATPase
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    580502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spu03009]
    580502
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    580502
SSDB
Motif
Pfam: AAA AAA_lid_3 Nucleolin_bd RuvB_N AAA_16 TIP49 AAA_5 AAA_14 AAA_22 AAA_28 AAA_2 AAA_18 AAA_33 RNA_helicase AAA_25 ABC_tran nSTAND3 Zeta_toxin Mg_chelatase AAA_17 Viral_helicase1 AAA_3 NACHT Vps4_C IstB_IS21 Rad17 TsaE Parvo_NS1 Sigma54_activ_2 NB-ARC CPT
Other DBs
NCBI-GeneID: 580502
NCBI-ProteinID: XP_030855175
Position
Unknown
AA seq 976 aa
MAPGKHSRQSGSDRKQYSSVYYGDRLLLKRVQEYADTESKNGYVDLDTMVEELQYIYKEY
GRKKKITFKKAVEKAYSCVESRQPRSSQDHDDFEARHLSKRRKQEDDALEDSDSDSFSSD
NPDYVSVQDSNLVNSTLSNLYKKGTPTNTPKNRSAASTPLGGTPQATPMPSDSDEDDDRD
SVEMSNVTLDLAGVGDPKEDDGKQSCRKPKLLLPNMKRKEESAQENSSQNDSFYISKTPS
KVARTPRRKPSAKGEDGVEASAKKKPRSSESEGGRKGKKKVIEPQRSTSTFADMGGNDST
LEEVCKLLVHMRHPEIYQQLGVSPPRGVLLHGPPGCGKTLLANAIAGELDLPYLKLAATE
IVSGVSGESEENIRDLFEQAQALAPSVLFIDEIDAITPKRETAQREMERRIVAQLLACMD
ELNNGTAHVMVIGATNRVDSLDPALRRAGRFDREISLGIPDEKARTRILHVLCRKLRLSG
DFSYHTLASLTPGYVGADLTALCREAAMAAVNRIFTDLQSKGKPILDAILGTSLQPNSTA
TICDQQQVQEEAIPSQQVAATQQVAATLQGDTTPTVEDMDTGSVTDLVSKSSSNDADTKE
TERYKMVLSWLKEHPPLSEAQLEGLSITMEDFKEALPNVQPSAKREGFATIPDVTWDDVG
ALEGVREELTMAILAPVRNPEAYHALGLXKPPGILLAGPPGCGKTLLAKAIANESGINFI
SVKGPELMNMYVGESERAVRQCFQRARNSSPCVIFFDELDALCPRRSDVSDSGSSARVVN
QLLTEMDGLEARKQVFIMGATNRPDIIDPAVLRPGRMDKILYVGIPSKKDRIAILRTITK
NGCKPVLEQEVNLMNLAEDARCEGFTGADLAAFVREASMSALRKVIKNGLLLERGDPAAT
SQKDSPSIVVNGDDFETAFRKVKPSVSRKDRIMYQRMRTTVLRDVSACDDEDATLKKPEE
RKEDSKPEESKEDPKT
NT seq 2931 nt   +upstreamnt  +downstreamnt
atggctccagggaaacattccaggcagagtggcagtgatcgcaagcagtactccagtgtt
tactatggagatcgtctgcttctcaagagagtgcaagagtatgctgacacagaatcaaag
aatggttatgtggatttggataccatggtggaagagctccagtatatttacaaagaatat
ggtagaaagaagaaaataactttcaagaaagcagttgaaaaggcatacagttgtgtcgag
tccaggcaacccaggtctagccaagatcatgatgactttgaggcgaggcatctatcaaaa
cgacgtaaacaagaggatgatgctttagaggactcagacagcgatagtttctcgtctgac
aatccagattatgtctcggttcaggactctaacttagtcaacagtaccttgagcaacctt
tacaagaagggaactcctaccaacacccccaagaaccgcagtgctgcatccacacccctt
gggggcacaccccaggccacgcccatgccttcggacagcgatgaggacgatgatagggac
agcgtggagatgtccaatgtgacccttgacctggctggggtcggcgacccgaaggaggat
gatggaaagcagtcatgtagaaagccaaagctattgttgccaaatatgaagaggaaagag
gaatctgcgcaagagaattcatctcagaacgacagtttttacatctcaaagacccccagc
aaggttgctaggacaccaagaagaaaaccatctgcaaagggtgaggatggggtggaggcc
agcgccaaaaagaaacctcgctcatcggaatcagaaggaggcagaaagggaaagaagaaa
gttatagaaccccagcgatcaacaagtacctttgctgacatgggagggaatgatagcaca
ttagaggaggtatgtaagctcctagtccacatgagacatcctgaaatctaccagcaactg
ggcgtgtcccctcctaggggggtactactgcatggaccaccagggtgtggcaagaccctc
ttagccaatgctattgctggggagttggacctaccttatctcaagcttgcagccacagag
atagtctctggtgtttcgggagagtctgaagaaaacatccgagatctctttgaacaagct
caggctttagcacctagtgttctgttcattgatgagattgatgccatcacaccgaaacga
gagactgctcagagagagatggagaggaggatagttgctcagctgttagcctgtatggat
gagctcaacaatggaactgcccatgtgatggtgattggtgcaacaaacagagtggattcc
ttagaccccgccctgaggagagcagggaggtttgatcgtgagatctctctgggtatacca
gatgagaaagcaaggacaaggatcttacacgtgttgtgtcgtaagctgcgtctatcaggt
gacttcagctaccataccctggcatccctgacccctggctatgtgggtgctgacctgaca
gcgttatgcagggaagcagcaatggctgctgtcaatagaatattcacagatcttcaaagc
aaaggaaagcccatattggatgcaattcttggcacatcactacaacctaacagtactgcc
acaatctgtgaccaacaacaggtacaagaagaagcaataccatcacaacaagttgctgcc
acacaacaagttgctgccacgttacaaggagatacaactccaacagtagaggatatggac
actggatctgtgacagatttggtcagcaagtcttcaagcaacgatgcagatacgaaggaa
acagagagatacaaaatggtgttaagttggttgaaggaacatcctcctctgtctgaagcc
cagctagaaggtctctctatcaccatggaagacttcaaggaagccttacccaacgttcag
ccgtcagctaaacgagaaggttttgccaccattcctgatgtaacctgggatgatgtagga
gctctggagggcgtcagggaggaactcaccatggccatcctggctccagtacgtaaccca
gaagcctaccatgccctgggtctcnacaaaccccctggtatcctcttagctggaccaccg
gggtgcggaaagacgctcctagcgaaagctatagccaatgaatctgggatcaatttcata
tcagtcaagggaccagaactgatgaacatgtacgtaggagagagtgagagagctgtacgt
cagtgcttccagagagctaggaactcatcaccatgtgttatcttctttgatgagcttgat
gctctatgccctagaagatcagatgtttctgattctgggtctagtgctagggttgtcaat
cagttattgaccgagatggatggcttagaagctaggaagcaagttttcatcatgggggcc
acaaacagaccagacataattgatccagcagtactacgcccaggaagaatggataagatc
ctctacgtaggaatcccttcaaagaaggatagaatagcaatactcaggacaatcacaaag
aatggttgtaaacctgtcttagagcaggaggtcaacctgatgaacctagcagaagatgca
agatgtgaaggattcacgggtgcagacttggcagcatttgtcagggaagcctcaatgtcg
gcactgagaaaggtcatcaagaatggtctattattagagaggggtgatcctgcagctacc
tctcagaaggactctccgtctattgtcgtcaatggagacgactttgagactgccttcagg
aaggtgaaaccatcagtatcaagaaaagatcgcatcatgtaccagagaatgagaacgact
gtactgagggatgtctcggcatgtgatgatgaagatgctacgttgaagaaacctgaggaa
agaaaggaagactcgaaacccgaggaaagcaaggaagacccaaagacatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (31)   
   Pfam (31)   
All databases (83)   

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