KEGG   Strongylocentrotus purpuratus (purple sea urchin): 587252Help
Entry
587252            CDS       T01019                                 

Definition
laminin subunit gamma-1-like
Orthology
K05635  
laminin, gamma 1
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:spu00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    587252
Cell adhesion molecules and their ligands [BR:spu04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      587252
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      587252
     Laminin-2 Extracellular matrix (ECM) components
      587252
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      587252
   VLA-3
      587252
     Laminin-10 Extracellular matrix (ECM) components
      587252
     Laminin-11 Extracellular matrix (ECM) components
      587252
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      587252
     Laminin-8 Extracellular matrix (ECM) components
      587252
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      587252
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      587252
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 1497 aa AA seqDB search
MHAIYACTLPLAHIFEREGLKGKFPXSLNLLIHPGKSFEITYIRLKFXSPRPESFAIYKR
TCQDCPWIPYQYYSGSCRGTYTLPDSEYVSYDDETLALCTSEFSDISPLTGGNIAFSTLE
NRPSARSFDNSAVLQDWVTATDILVMLTRLNTFGDEVFRVPNVLRSYFFAITDFSIGGRC
KCNGHASHCVEAPNDPYNRLVCQCEHNTAGPDCGECLPLYNDRKWTRATAGNANECMRCN
CNFHADRCFFDEELYNRTGSGGHCMECRDETSGVSCERCRDNYFRTSPDARCQPCNCDQT
GSLNQQCDSSGRCQCKVGVGGDKCNQCLPNFYDFGEGGCRSCECVRAGSVDNNPDCNQGT
GLCNCKLHVEGRDCETCKPGFFNLQEADEFGCLPCFCHGHSSSCSSAPGYDIAYIESNFN
SGVDGWKAESRNGDQELLVYNAIRQDIGIATVDNQPMYFIAPDEYLGNKLFSYGQELSFK
LRLGSDDVSLSVEDLVLEGGGRQISAPLVAQGNPRPGVYPQKFTFKLRAEDDMGWVQRPS
AFEFQSLLSNLTAIKIRATYSDRGQGLLDDVRLVSGRRSVGPQSTRATFVELCSCPTGYV
GQFCESCAAGYRRDPYGNGPFTRCIPCECNGHADYCDVDTGECICNHNTMGTSCELCQDG
FYGNALEGTAYDCTRCPCPGGTNCFVDNLGDVVCTECPSGYVGNRCDYCADGYYGDPTGI
QGQRTACGQCYCNYNIDPNSVGNCDRFTGECLKCVFDTGGFYCENCLPGFYGNALGSPKG
EQCQACNCYVSGSTSNECDQSNGQCSCMPFVTGRDCSECEAGYWNIDSGRGCEPCYCEST
GSTSDQCDIRSGQCPCKPGVDGLRCDQCQYDHYDYSVEGCTPCECNPQGSLYANCTDDGV
CDCQPGVIGDKCDSCEENFYNIALGCIPCPECYNLVRDNVNVHRDNLDALRDKINQISSN
PTVINDTDFEMRLRELEGLLNQTIDDAQRVTDVAEAMAIINRLKRMLPSAQEYLDNEGWA
LLEKLRGLTANMSAQDRLMQEIAREAKQLADNHTEMALMVEETSARALEIAYLALDAARD
SGDGGDLEAMVEGVERKRALDAARDSGDGGDLEAMVEGVERKYVDAQELFNQASQAADEC
FERAQRAAEEALRLLTKANMPLSPIDVNSLLDAANDISFRARQLMDEANALRRENADLLA
QVAEDARTAADLLDQAVAAENLIDLLLAKADNARSIALEAKRKGDETLQEAKDILRVLQG
FNEEIEESKQAADDAKLRIPDIEAMINQANITAHNASDAIAAAEGDAMKARDYARMAEGN
ATLASEAARGVRTDAEATMLEAQEQNDRADDLAADAMETMMRLNAIEGQAEDDGDMADRA
QEKANAAKQVTGAALQAAEEALAQLQMIKGELDSAGSIDLERLQDLEDELLNVNATITYD
LRLDDTMDELRAYAMQQAGWISAYQFDLSEIRAEVANVEEIRDALPEFCPNESILEP
NT seq 4494 nt NT seq  +upstreamnt  +downstreamnt
atgcatgccatctatgcgtgtactctgccactggcccatatttttgaaagagaggggcta
aaaggaaaatttccttgatctttgaatctcttgatacatccaggtaaatcctttgagatc
acatacattcggctgaaatttnactcgccgcggccggagagttttgccatctacaagcgt
acgtgtcaggactgtccttggataccctaccagtattacagcggctcatgtagaggaacc
tacaccctcccagatagcgaatacgtcagctacgatgatgaaacattggcgctctgcacc
agtgaattcagcgacatctcgccactcacaggaggaaatattgctttcagtacgctggaa
aatagaccgagtgcaaggagttttgataatagtgccgttttacaggattgggtgacagct
acagatattctggttatgctgacgagattaaacacttttggagatgaagttttcagggta
ccaaacgttctacgatcatacttctttgccatcacagatttctctattggtggaaggtgt
aaatgcaacggtcacgccagccactgcgtggaagcacccaacgatccttacaaccgtctt
gtatgtcagtgcgaacacaacacagcagggccagactgtggcgaatgtctccctctgtac
aatgacaggaagtggacgagagccactgctgggaacgcaaatgaatgcatgagatgtaac
tgcaacttccacgctgaccgttgcttcttcgatgaagagctttacaaccgaacaggatcc
ggtggtcactgcatggagtgccgtgatgaaacttctggcgtcagctgtgagcgttgtcgc
gacaactacttcaggacttctccagacgcccgatgccagccttgtaactgtgaccaaaca
ggatcattgaaccagcagtgtgatagctcaggacgatgccagtgtaaggtgggagtagga
ggagataaatgtaaccagtgtcttcctaacttctatgactttggtgaaggtggatgcagg
agctgcgagtgtgtgcgtgcaggaagtgtagacaacaacccagactgtaaccagggtaca
ggtctctgcaactgtaaacttcatgttgaaggaagggactgcgagacctgcaagcctggt
ttcttcaaccttcaagaggcagatgagtttggatgccttccctgcttctgtcatggtcat
tcatcctcttgctcctctgctcctggctatgacattgcctacatcgagtccaacttcaat
tcaggtgtggatggttggaaagccgagagtcgaaatggagaccaggaattgcttgtttat
aatgccatcaggcaggacatcggtatcgcaacagttgacaaccaacccatgtactttata
gccccagatgagtaccttggtaacaagttgttcagctatggtcaggagctgagcttcaag
ctgagactgggcagtgatgatgtgagtctcagcgtggaggatctcgtcttggagggaggt
ggcaggcagatctctgctccgctggttgcccagggcaacccgcgaccaggtgtctacccg
caaaaatttaccttcaaactgcgagctgaggatgatatgggatgggttcaacgaccttca
gccttcgagttccagagcctcctttccaacctgactgccatcaagatcagagcaacctac
agtgatagaggtcaaggactgcttgatgacgtccgtctggtcagtggccggcggtcagtc
ggtccacaaagcaccagggctacattcgtagagctgtgcagctgcccaaccggctatgtc
ggtcaattctgtgagtcctgcgctgctggctaccgcagggacccctacggcaatggacct
ttcacacgttgcatcccctgcgagtgcaatggacatgccgactactgtgatgttgatact
ggtgaatgtatctgtaaccacaacaccatgggaacaagctgtgaactatgccaggatggt
ttctatggtaacgcccttgagggcacggcctatgactgcacacgctgcccctgccccggt
ggaaccaactgctttgtcgataacctaggtgatgtggtctgtaccgagtgcccatcaggc
tatgttggaaaccgctgtgattactgtgctgatggttattacggtgaccctactggcatc
caaggccagcgtacagcctgcggacagtgctactgtaactacaacattgaccccaattct
gtcggcaactgtgataggttcactggagaatgtctcaagtgtgtctttgacacaggagga
ttctattgtgagaactgtttacctggtttctatggcaacgcacttggtagtcccaaggga
gagcagtgtcaggcctgcaactgctacgtcagtggctcgactagtaacgaatgtgaccaa
tccaatggccagtgtagctgcatgcctttcgtgaccggccgtgactgcagcgaatgcgaa
gccggctactggaacatagacagtgggcgtggctgcgagccttgctactgtgaaagcacc
gggtcaacgtctgaccagtgcgacatccgcagcggtcagtgtccttgcaagccgggagtt
gatggtctaaggtgtgaccagtgccagtatgaccattacgactactctgtagaagggtgt
actccatgtgaatgcaatccccaaggatccctgtacgccaattgcacagacgatggtgtg
tgcgactgccagccaggagtcatcggtgacaagtgtgattcctgtgaagagaacttctac
aacattgccctgggctgcataccctgccccgagtgctacaatctggtaagggataacgtg
aacgtgcatcgcgacaacctggatgccctgagggacaagatcaaccagatctccagcaac
cccaccgtcatcaacgatacagactttgagatgcgactgagggagctcgaaggactccta
aatcagaccattgacgacgctcagagagtgacagatgttgccgaagcgatggctatcatc
aatcgtctcaagcgtatgttgccttctgcacaggaataccttgacaatgagggttgggcg
ctgttggagaagctgaggggactcacagctaacatgtctgctcaagataggctgatgcaa
gaaatagcccgagaggccaagcagctagctgataatcacactgagatggcattgatggtg
gaggagacctcagcgagagctctggagattgcctacctggccttggatgctgcacgtgac
agtggagatggtggggacctggaggctatggtagaaggagtggagcgcaagagggccttg
gatgctgcacgtgacagtggagatggtggggatctggaggcaatggtggaaggagtggag
cgcaaatatgtcgacgcccaagaactgttcaaccaggcttcgcaagccgctgacgaatgc
tttgagagggcgcaacgggctgcagaagaggcactccgccttctcaccaaggccaacatg
cccctctcgccgattgatgtcaattctcttcttgatgcagccaatgatataagcttcaga
gcaaggcagctgatggatgaagccaacgctctgaggagagagaacgctgatctcctagcc
caggtggcggaggacgccaggacagccgctgatctgctggaccaagccgtcgcagcggag
aacttgattgatctgttgctggccaaggccgataatgctcgttccattgccttggaagcc
aagaggaaaggagatgagacacttcaagaagccaaagacatcctcagggtattacaagga
ttcaacgaggagattgaagagagcaagcaggcagctgacgatgccaagctcagaatccct
gacatcgaggctatgatcaaccaggccaacatcacagcccacaatgcatcagatgccatc
gcagctgcagagggcgatgccatgaaggcacgagactacgccaggatggcagaaggaaac
gcaactttagcttcagaggctgccaggggggtcaggacagacgccgaggccaccatgctt
gaggcacaggaacagaacgaccgcgctgacgacctcgctgctgatgcaatggaaaccatg
atgagactcaatgccatcgagggccaggcagaagacgatggggatatggcagatcgggct
caggagaaggcgaacgctgccaaacaggtgacgggtgctgccttacaggctgccgaggaa
gctctagctcaactccagatgataaaaggagagctagatagtgctggttctatcgacctt
gagagactacaggacctggaggatgaactcctcaacgtcaacgccaccataacctatgac
ctcaggctagacgataccatggatgaactacgggcctacgccatgcagcaagcaggctgg
atctcagcgtatcaatttgacctcagtgaaatacgagcagaggtggccaatgtggaagaa
atcagggatgccttgcctgagttctgccccaacgaaagcatcctagaaccttaa

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