KEGG   Strongylocentrotus purpuratus (purple sea urchin): 591177
Entry
591177            CDS       T01019                                 
Name
(RefSeq) DNA-binding protein SMUBP-2
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spu03009]
    591177
   03012 Translation factors [BR:spu03012]
    591177
Enzymes [BR:spu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     591177
Ribosome biogenesis [BR:spu03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   591177
Translation factors [BR:spu03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    591177
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Viral_helicase1 AAA_16 AAA_22 ResIII UvrD-helicase nSTAND3 AAA Helicase_RecD NTPase_1 Herpes_ori_bp Herpes_Helicase Flavi_DEAD cobW DEAD bpMoxR UvrD_C_2 SRP54 IstB_IS21 AAA_14 AAA_7 PhoH AAA_6 RuvB_N AAA_33
Other DBs
NCBI-GeneID: 591177
NCBI-ProteinID: XP_030835839
Position
Unknown
AA seq 1044 aa
MSSIGEFVRKHLDLLDVERQAEIEQTSDLLGKLSVRELERRGVCLLKLRCASQATGLYGR
TVLTFEPLRSQGQEGKLPAHNFGPGDIAGVSHSNSDTTSSSLLASGIVSKVTGSSIAVAF
EENVEGIARGHDDTYKLTKLANDVTYRRLKKALHELEEYRTGPAVRLIEVLFGESDLGSP
VSLPANKNPGSESVEFFNTNLNESQRDAVTFALCQREVAVIHGPPGTGKTTTVVEVIQQA
VKQNMKILACAASNVAVDNLLERLSANASCSMVRLGHPARLLPSIQRFALDAILASSDGA
SIVRDIRRDLDTTLSQIRKTKDKDEKHRLKDEMKYLRKDLKSREQKAIQDILMAADVVLA
TNTSASTNGPLRALQQGHFDLVVIDECAQSLEAACWIPLLNARKCLLAGDHHQLPATIMS
KQAAKEGLATSMMERIIDLYGNRVVQMLTTQYRMNDEIMRWSSDQLYDGKLQSHQSVATH
LLKDMPCIMENENTTLPLLLIDTAGCDVLELELEDEVSKGNEGEADIVSHHVSNLISSGL
SPAKIAVIAPYNLQVDLLRLRLSSKYPGLEIKSVDGFQGREKEAVVISLVRSNDRGEVGF
LKEDRRINVAITRARRHLAVVCDSQTVGKHPFLKSLVDYFNDHGEVRTAFEYNEVLTSSL
GAPRPDHLVFKSKTSSSHKGTKATGAVPKGQRKGQTKKPEVTGHGSTIDTVQRSKENATF
LNETTRRLLEFKKEPEERKVVFPSLLNSHQRYIVHELAESFGLNHLSVGEGKERHIVVRK
PKERTEPPPVERKSEERNTPVTGKEDSNLTVEDLVEDFETENKMELLYEEEEREESTEES
NAGACNVEKSEVEQTKEKEKEVKSRDSETDEMNLWKCKFCGKRLPPGNHLLHEIHCEKTQ
AEKKRQSSAGVNKKNRNKAQKQKQKQNLEEAEEEDFDTLVAIAMKRDNECNFTRCKEKIT
ITGLMCEFCMRRYCFKHHIPEIHGCEEMARHHVRHQMLKSKVVTNGSGVREKKVDPAHKA
NLQRKLGSKLGQLGEQRQRKQKPK
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgtcttccattggggagtttgtgaggaagcatctggatttgctggatgtagaaagacag
gcagagatcgagcagacaagtgatctacttggtaagctgtctgtacgcgagctggagaga
cgaggtgtctgccttcttaagcttagatgtgccagccaagctacaggactctatgggagg
acagtactgaccttcgaacccttgaggtcacagggtcaagagggcaagcttccagctcat
aactttggaccaggtgatatagcaggagtgagccactccaacagtgataccacttcctct
tctctccttgcatcgggtatcgtgtcaaaggtcacaggctctagtattgctgtagcgttt
gaagagaatgtcgaggggatagcacggggtcatgatgatacctacaaacttaccaagctt
gctaatgatgtcacatataggagactgaaaaaagctcttcatgagttagaggagtaccgc
actggacctgctgttcgtctgattgaagtcttgtttggagagagtgatctaggctcaccg
gtcagtcttccagccaacaagaatccaggatctgagagtgtagaattcttcaacactaat
ctgaatgagagccaaagagatgctgtgacctttgccctatgtcagcgagaggtcgctgtg
attcatggcccacccggtacaggaaagacaacgacggtggttgaagttatccaacaagct
gtgaaacaaaatatgaagattctagcatgtgctgcatccaacgttgcagtagacaacctt
ctagagcgtttgtctgccaatgcatcatgttctatggttcgtcttggtcatcctgcccgg
ttgctacccagtatccagaggtttgcattggatgctatcctagcttccagtgacggagca
tctattgtcagagatatcagaagagatctagatactacattgagccaaatccgcaagacg
aaagacaaagatgagaagcatcgtctcaaagatgagatgaaataccttagaaaggattta
aaatccagagagcagaaagctatacaagatatcctcatggctgctgatgtagtcttggca
accaacactagtgcttccacaaacgggcccctgagggcgctacagcagggacactttgac
ttggtggttattgatgaatgtgctcagtctcttgaagcggcgtgttggatccctcttctc
aatgcacgaaaatgtctgctagctggtgatcatcatcagttaccagctactatcatgtct
aagcaggcagctaaagaaggcctagcaacctccatgatggaacgcatcatcgatctctat
ggcaaccgagtagtacagatgttgacgactcagtacaggatgaatgatgagataatgaga
tggtcctctgatcagctttatgatggcaaactacaatcacatcaatcggtggctactcat
cttctcaaagatatgccatgtattatggagaatgagaataccaccctgccactgcttctg
atagacacagctgggtgtgatgtactggagctggaacttgaagatgaagtctcaaaagga
aacgaaggagaagcagacattgttagccaccatgtcagcaacctcatctccagtggtttg
tccccggcaaagattgctgtcattgctccttacaatctgcaagtagatctcctgcggctg
aggttgtcatctaagtatcctggtttagagatcaagtctgtggatgggtttcaaggcaga
gagaaagaagccgttgtgatctcattggttcgatctaatgacagaggtgaagttggattc
ctcaaagaagatcgtcgtatcaatgtcgctatcacccgagcacgccgccatcttgcagtc
gtctgtgactcacagaccgtaggaaaacatcccttcttaaagagtctcgtagactacttc
aacgatcatggagaagtccgcactgctttcgagtacaatgaagttctgacttcttcgctt
ggggcacccagaccagatcatcttgtcttcaaatcaaagacttcttccagtcataagggt
accaaggcaacaggagcagtacccaagggtcaaaggaaaggtcaaactaagaagccagag
gttacaggtcatgggtcaaccattgacactgttcaaaggagcaaggagaacgccactttt
ctgaatgaaaccacaaggagattgttggaattcaagaaggaaccagaagaaaggaaagtt
gtgtttccttctttgttgaactctcatcagagatacattgtacatgagcttgcggaaagc
tttggactgaaccacttgagtgtaggtgaggggaaggagagacatattgtagtcagaaag
ccaaaggaaaggaccgagccacccccagttgaaaggaaatcagaggagcgaaataccccc
gtcaccggcaaggaagattccaacctcactgtggaggacttggtggaggactttgaaaca
gagaataaaatggagctcttatatgaggaggaggaaagagaagaatcaacagaagaaagc
aatgctggggcgtgtaatgtggagaagtctgaagttgaacagaccaaagagaaagagaaa
gaggttaagagcagagactcagagactgatgagatgaatctatggaaatgtaaattttgt
gggaagcgtttacccccaggaaaccatctcctgcacgaaatccactgcgaaaagacgcaa
gccgagaaaaaacggcagagttcagcgggggtgaataaaaagaatcgcaacaaggctcag
aagcagaagcagaaacagaatcttgaggaagccgaggaggaggattttgatactcttgtt
gctatagcaatgaagcgtgataacgagtgtaactttacacgatgcaaagagaagattacc
attactggtttgatgtgtgagttctgtatgagacgatactgctttaagcaccatatacct
gagattcatggatgtgaagagatggcacggcaccatgtgaggcaccagatgctgaagtca
aaggtcgttaccaatggcagtggggtcagagaaaagaaggttgaccccgcacacaaagcc
aatctgcagaggaaattaggctctaaacttggtcagctcggcgagcagaggcagcgtaaa
caaaagccaaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (31)   
   Pfam (31)   
All databases (92)   

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