KEGG T02012: SerAS13

Serratia sp. AS13: SerAS13_4003

Entry

SerAS13_4003 CDS T02012

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sra Serratia sp. AS13

Pathway

sra03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sra03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD Viral_helicase1 AAA_11 AAA_22 PhoH DUF2075 UvrD-helicase AAA_16 AAA_28 T2SE AAA_25 CbiA FtsK_SpoIIIE SRP54 ResIII AAA AAA_17 UvrD_C AAA_10 MobB NTPase_1 TrwB_AAD_bind Flavi_DEAD KaiC DUF87 AAA_18

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4274893..4276743)

AA seq 616 aa
MIALLEQAQALGVLRPLDLQFARIVAGEEEPDILLAAACLSAEAGAGHVCLMLEQLLPEN
LFEGRQPELAQAVWLAAGQPDLARWQQRLMASAAVGDGSSAMPMVLQQQRLYLQRMWQNE
GEVAEFISSDSIHQAVDEPELHAILDRLFGEATNEPDWQKIAAAVAATRRIAVISGGPGT
GKTTTVAKLLAALVQLADGRRLRIQLAAPTGKAAARLTESLGSAGRQLALTPEQRALFPT
DASTLHRLLGAQPNSQRMRYHRGNPLHLDVLVVDEASMVDLPMMARLIAALPTQARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSAARAEQLTRLTGCLLQGQSAQAEAAVRDSLCLL
RKSYRFDADSGIGQLAFAVNAGDGKRAAWALSGSFSDVAGYPLAETEDYQALLNACVAGY
GDYLQRVAARADAGEVLAEFGRFQVLCALREGPFGIAGLNERIEAGLQRAGLIQRTPGAL
GRWYPGRPVMIGRNDSALGLFNGDIGIALRDESGELRVHFQLPDGNIKSVQPSRLPAHET
AYAMTVHKSQGSEFDHTVLVLPNHFLPVLTRELVYTAITRARSQLSLYATETVLMRAIRT
PTQRRSGLAERLQITP

NT seq 1851 nt +upstreamnt +downstreamnt
atgatcgcgctactggaacaggcacaggcacttggcgtgctgcgcccgttggacctgcag
tttgcccgtatagtggccggtgaggaagagcctgacattctgctggctgccgcctgcctc
agtgcggaggcaggcgccggtcatgtttgcctgatgctggaacagttactgccggaaaat
ctgtttgaagggcgtcagccggaactggcgcaagccgtgtggctggcggccgggcaaccg
gatcttgcccgctggcagcagcgcctgatggccagtgcggcggtgggtgacggcagcagt
gccatgccgatggtgttgcaacagcagcgtttgtacctgcagcgcatgtggcagaacgaa
ggcgaggtggcggagtttatcagcagcgacagtatccatcaggcggttgatgaacccgaa
ctgcatgccatcctcgatcggctgttcggcgaggcgacgaatgagccggactggcagaaa
attgctgccgcagtggccgcgacgcggcgtattgctgtgatttcaggtgggccgggcacc
ggcaaaaccaccaccgtcgccaaattgctggcggcgctggtacagcttgccgatggcagg
cgcttgcgtattcaactggcggcacccaccggcaaggcggcggcgcgtctgaccgaatcg
ctcggcagcgccggcaggcagttggcgttaaccccggagcaacgcgcgctgttccccacc
gatgcgtcgacgctgcaccgcctgttaggcgctcagcccaatagccagcgcatgcgttat
caccgtggcaacccgctgcatctggatgtgctggtggtggacgaggcttcaatggtcgat
ctgccgatgatggcgcgtctgattgccgcattgcccactcaggcgcgggtgattttcctt
ggcgacagggatcaactggcgtcggtagaggccggtgctgtactgggggatatctgccgt
tttgccgagcagggatacagtgctgctcgtgcggaacaactcacccggctgacaggctgc
ctgttgcaggggcaaagtgcgcaggcggaagcggcggtgcgagacagcctgtgcctgctg
cgcaaaagctatcgttttgatgccgattcgggcattggtcaattggcttttgcggtgaat
gccggtgacggtaagcgtgcggcttgggcactcagcggcagtttcagtgacgttgcgggt
tacccattggcagaaacggaggactatcaggccctgctgaacgcctgtgtagcaggctac
ggtgattatttgcagcgggtcgctgccagggcggatgcgggagaggtgctggcggagttt
ggccgtttccaggtgctgtgcgcgctgcgcgaagggccattcggtatcgccgggctgaac
gagcgtatcgaggcgggattgcaacgggccgggctgatccagcgtacgccaggggccttg
gggcgttggtatcccggtcgtccggtgatgattggccgcaacgacagtgcgttggggctg
tttaacggcgatatcggtatcgctctgcgtgatgagagcggcgagctgcgcgtgcacttc
caactgccggacggcaacatcaagtcggtgcaaccgagccgtttaccggcgcatgaaacc
gcctatgcaatgacggtgcacaagtctcagggatcggagtttgatcatacggtgctggtg
ttgcccaatcacttcttgccggtactgacccgcgaactggtgtataccgccatcacccgc
gcgcgtagccagctttcgctgtatgccaccgagaccgtgctgatgcgggcgatccgcacg
ccaacccaacgccgcagcgggttggcggagcgcttgcagataacgccataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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