KEGG   Candidate division SR1 bacterium RAAC1_SR1_1: P148_SR1C001G0505
Entry
P148_SR1C001G0505 CDS       T02946                                 
Name
(GenBank) hypothetical protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
srb  Candidate division SR1 bacterium RAAC1_SR1_1
Pathway
srb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    P148_SR1C001G0505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srb03400]
    P148_SR1C001G0505
Enzymes [BR:srb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     P148_SR1C001G0505
DNA repair and recombination proteins [BR:srb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     P148_SR1C001G0505
 Prokaryotic type
     P148_SR1C001G0505
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 DUF2400 IMS_HHH HHH_5
Other DBs
NCBI-ProteinID: AHB41297
UniProt: A0A288DH58
Position
510160..510843
AA seq 227 aa
MSKLKQIFTYIKRLFPDPKTELIYNMPFQLVVAVILSAQTTDIQVNKATSNLFKNIYTPQ
NIIQIGQSKLIKSISSINYYKTKGKNIFLLSKLIVDSKKVKDLGIEKWNTYEDKNNIYFI
PNTIEGLKKLPGIGEKTAKVVAHVLFGAPVIAVDTHVHRVCNRLGIVSTKTPEQTSKLLE
NIIPKQYKSIAHHSIILFGRYYCTAKKPKCETCELQSICKRYQSIKK
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtccaaattaaaacaaatatttacatatataaagagacttttccccgatccaaagact
gaattaatatataatatgccatttcaattagtagtagctgtaatattatcagctcagaca
actgatatacaagtaaacaaagcaacttcaaatttattcaaaaatatatatactccccaa
aatataatacaaatatgacaatcaaaattaataaagtcaatatcgtcaattaattactat
aagaccaaatgaaaaaatatatttctcttatctaagcttattgtagacagtaaaaaagta
aaagatttatgaatagaaaaatggaatacctacgaggataaaaataatatatattttata
cccaacacaatagagggacttaaaaaattgccttgaatttgagaaaaaacagcaaaagta
gtagctcatgtattattttgagcaccagttattgcagtagatacccatgttcatagagta
tgtaatagattatgaatagtttcaacaaaaactcctgaacaaacttcaaaattacttgaa
aatattattccaaaacaatacaaatcaattgctcatcatagtataatcctcttttgaaga
tattattgcacagccaaaaaacccaaatgtgaaacatgcgaattacaaagcatctgtaaa
cgatatcaatcaattaaaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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