KEGG   Streptomyces rapamycinicus: M271_06245Help
Entry
M271_06245        CDS       T02907                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
src  Streptomyces rapamycinicus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:src00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M271_06245
Enzymes [BR:src01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M271_06245
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M271_06245
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
complement(1654050..1654838)
Genome map
AA seq 262 aa AA seqDB search
MPELPDVEGFRRTLASCAQGHRVERAEVADPGVLHGVTAQRLKRDLKGRRFAAPRRHGKW
LIAPTDGPTVVLHFGMTGRLVCGADSEPAGRFQRVAFDLDDGHRLGYEDQRKLQGIWLAA
TDDDIDRIIGDQGPDALSLSRADLDRLLEGRRGRVKATLTDQAVIAGLGNLLGDEILWHA
RIHPRRPVNALTDDERDELHSALREVLRASVRAGRVPDDPDWLTGRRDDPDPHCPRCGNP
LRRGRISGRTSLWCPHCQREDP
NT seq 789 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagcttccggacgtcgaggggttccggcggacgctcgcctcctgcgcccagggc
caccgcgtagagcgggcggaggtggccgatccgggggtgctgcacggggtgaccgcgcag
cggctgaagcgcgacctcaagggccgccgcttcgcggcaccgcgccgccacggcaagtgg
ctgatcgcccccaccgacgggcccaccgtcgtgctccacttcgggatgaccgggcggctg
gtctgcggggcggactccgaaccggccggccggttccagcgcgtcgccttcgacctcgac
gacggccaccgcctcggctacgaggaccagcgcaaactccagggcatctggctcgccgcc
accgacgacgacatcgaccggatcatcggcgaccagggcccggacgcgctctcgctgagc
cgggccgatctggaccggctgctggaagggcggcgcggacgcgtcaaggccaccctgacc
gaccaggccgtgatcgccggactcggcaatctgctcggcgacgagatcctgtggcacgcc
cggatccatccgcggcggccggtgaacgcgctgaccgacgacgagcgcgatgagctgcac
agcgcgctgcgcgaggtgctgcgcgcctcggtacgggcggggcgggtgccggacgacccg
gactggctcaccgggcggcgcgacgatccggatccgcactgcccccgctgcggcaatccg
ctgcgccgcggccggatctccgggcggaccagcctgtggtgcccccactgccagcgtgag
gacccctga

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