KEGG   Salpingoeca rosetta: PTSG_00054
Entry
PTSG_00054        CDS       T04136                                 
Name
(RefSeq) splicing factor SF1
  KO
K13095  splicing factor 1
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_00054
Spliceosome [BR:sre03041]
 Complex A
  Other components
   Complex A specific factors
    PTSG_00054
SSDB
Motif
Pfam: SF1-HH KH_1 zf-CCHC DnaJ_CXXCXGXG zf-CCHC_3 zf-C2H2_10 Pcc1 KRR1-like_KH2
Other DBs
NCBI-GeneID: 16067809
NCBI-ProteinID: XP_004998609
UniProt: F2TVE1
Position
Unknown
AA seq 592 aa
MSDEMVAQALKRAKAREEGLAASFMAPAAETEEERGRRRKRRSRWGNQPAPTITPLLPTT
LPPGLTKEQEKQFLTQVRIDELTTKIRNKYVPEDRSPSPEPVYNQQGQRLNTAEIRYRQK
YEKERHDLIQEMMKLKPSYRPPMDYKPPDNKLTDRVIVPQEKYPDINFMGLLIGPRGHTL
KKLERETGAKIMIRGKGTVKAGKAGARPSANDFEGEPMFALIQATDAQKLRKAVATIEEV
IKMAIETPEGQNELKRMQLRELALLNGTLRDDEQFLRCKNCGSSLHRTFQCPEKQNFVNQ
QTCSVCGGTGHVAADCRYKRPNASGPPASSDTANQAKMDSEYLSLMAELGEVPAQPPPPP
ATTTTTAPARRTGPILGEAPPNLMRSHQPPASTAAPPPPPLPSSSTPASSGPPQHTSAYP
PYQPATSSTAPMTTTTTTSAPPPPPTSAPPPPPPPTAAAVGTGNGQQGPPLITPPVPGGS
HARPSVPPISGGAPPPPPRPYGGGGYGHNSYHQQPHNQGGWPGYQGQHYQGHYNQYGGYH
GYHQQGYGQHYPYDQQGYGQQPPPPPPPDNQPPPPPPPPDNQPPPPPPPPSN
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtctgatgagatggtggctcaggcgctgaagcgcgccaaggcgcgggaggaagggcta
gctgcttcgttcatggcgccagcggcagagacggaggaagagcgcgggcgccgccgcaag
cgcaggagcaggtggggcaaccagcccgcgccaaccatcaccccgctgctgcccaccacc
ctgccgccgggcttgaccaaggagcaggagaagcagttcctgacgcaggtgcgcattgac
gagctcaccaccaagatccgcaacaagtacgtgccagaggatcgctcgccgtcgccagag
cccgtgtacaaccagcagggccagcgcctcaacacggcggagatccggtaccggcagaag
tacgagaaggagcgccacgacctcatccaggagatgatgaagttgaagccatcgtacaga
ccgcccatggactacaagcctccagacaacaagctgactgaccgcgtcattgtcccacag
gagaagtacccagacatcaacttcatgggcctgctcattggaccgcgcggccacaccctc
aagaagctggagcgcgagacaggtgcaaagattatgattcgcggcaagggaaccgtcaag
gcaggcaaagccggtgcacgcccctctgcaaacgactttgagggcgagcccatgtttgcg
ctgatccaggcgacggacgcgcagaagctgaggaaggccgtggccaccatcgaggaggtg
atcaagatggccattgagacgcccgagggccagaacgagctcaagcgcatgcagctgcgc
gaactcgccctgctcaacggtacgctgcgagacgacgagcagttccttcgctgcaagaac
tgcggctccagcctccatcgcacgttccagtgccccgagaagcagaactttgtgaaccag
cagacgtgttctgtctgtggcgggacgggtcacgttgctgccgactgccgttacaagcgc
cccaatgcgtcaggcccgcctgcttcgagcgacacggccaaccaggccaagatggacagc
gagtatctgtccctcatggctgagcttggtgaggtgccggcccagcccccaccaccgcca
gctacaacaacaacaacagcgccggcgcggcgaacgggccccatcttgggagaggcgccg
ccaaacttgatgcggtcgcaccagccgccagcatcgacagctgcaccgccgccgccaccg
ctgccatcgtcgtcaacaccggcatcctcaggcccaccgcaacacacgtccgcatatccg
ccgtaccaacctgcaacgagcagcacagcaccaatgacaacgacaacaacaacatcagca
ccaccaccgccgccaacatcagcaccaccaccaccaccaccaccaacggcagcagcagtg
ggcacgggcaacgggcagcaggggccaccgctgattacgccgcctgtgccgggtggcagc
cacgctcgcccctccgtgccgcccatcagcggtggggcgccgccaccaccaccacgccct
tacggcggcggtggttacggacacaactcctaccaccagcagccccacaaccaaggcggc
tggcccgggtatcaagggcagcactaccagggccactacaaccagtacggcggctatcac
ggctaccaccagcaaggatatggccagcactacccatacgaccagcagggctacggtcaa
cagccaccgcctccgccacctcccgacaaccagccaccacctcctccacccccaccagac
aaccagcctccacccccacccccgccgccgagcaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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