KEGG   Salpingoeca rosetta: PTSG_03511
Entry
PTSG_03511        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K14571  ribosome biogenesis ATPase
Organism
sre  Salpingoeca rosetta
Pathway
sre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PTSG_03511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sre03009]
    PTSG_03511
Ribosome biogenesis [BR:sre03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    PTSG_03511
SSDB
Motif
Pfam: AAA AAA_16 AAA_22 AAA_18 nSTAND3 AAA_28 AAA_33 AAA_24 AAA_5 AAA_30 IstB_IS21 AAA_29 nSTAND1 AAA_14 AAA_lid_3 AAA_7 TIP49 RuvB_N AAA_19 ABC_tran TsaE NACHT ATPase TniB ATPase_2 T2SSE DUF815 Viral_helicase1 AAA_11 SLFN-g3_helicase TrwB_AAD_bind Cas3_I-F_Cas2
Other DBs
NCBI-GeneID: 16075826
NCBI-ProteinID: XP_004995245
UniProt: F2U5U0
Position
Unknown
AA seq 632 aa
MLPGTAVVSQQLQTALRMRPRTGTGDAWTDDDRCILVTGASGTGKTTWLRHFMTTNGVAF
EETSADAFFTASDQFAAINRRFKRAVERGKQARFVWILDNFEMVGAKTFRSIVESHVKAH
FLDALRKFTQRTARHNTYIVAVTSKPDQLDERLQRFGQFFHTCIELSAPTARVRREIVEM
FLQKRPSTRDTHGGGDGDTHDNKGQQQQEQGDCDGKKVEARADRPLSHRKSATDTWQRFS
QDLARLIEARGHGFKAGDIQAFLQQALTRNSRIYDKYGRCAGVRELAVWLHKFRGTLPSS
TVPSGTHLSLADLCGCCAVKRQLWQYFLTPLAAAMASAADGCDDDAPFASRDAQQMHRGD
AEAQACGTAPCDAVHPTSTAAPVPAPAPVSVPLRRGTAHASVRPSHGILLHGPSGTGKTS
LCLATAAAAGLNVIHVLGSNIRSKIVGESEAAVAKVFRDAANCRPCVLLVDQLESICGKH
SEDDRASQRLTAAFVRELDAVHANADAWASSGGGVYVLATTQDVNSIDPVVLRPGRVETL
VRTTIPTAEERREMLDELIWNTPLQLEDDTFELRDDLVDMTAGFSHAEIAQVFQEAGMAA
LRQWPHFHDADDLHVRGRHLISCARSLAQQQH
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgctgcctggaacagcggttgtgagccaacagctgcaaacggcgctgcggatgcgccct
cgcactggcacaggtgatgcttggaccgacgatgaccggtgcatcctggtcacgggtgct
tctggaacagggaagaccacgtggctgcgacacttcatgaccacgaacggcgtggcattt
gaggagacaagcgccgatgcgtttttcacggcctcggatcagtttgcagcgatcaatcgc
cgtttcaagcgcgccgttgagcgcggtaagcaagctcggtttgtgtggattctggacaac
tttgagatggtgggcgccaaaacctttcgcagtatcgttgaatcgcatgtgaaagcacac
ttcctggacgcccttcgaaagtttacacagaggacggcacgccacaacacctacattgtt
gccgtgacaagcaagcccgatcagcttgacgagcggcttcagcggtttggacaattcttc
cacacgtgcattgaactgtctgcaccaacggcgcgcgtacgccgggagattgtggagatg
tttcttcagaagcgacccagcacgagggacacgcatggtggtggggatggtgacacgcac
gataacaagggacagcagcagcaagaacagggggattgcgacgggaagaaagtcgaggca
cgcgcggacagaccgctgtctcatcgcaaatcagcgacagatacatggcagcgcttttcg
caagatctagcgcggttgatagaagcgcgcgggcacgggttcaaagcgggcgatatacag
gcgtttctgcagcaggcactcacccgcaacagccgcatctacgacaaatacggccgctgt
gcaggggtgagggagctggctgtttggctgcacaagtttcgaggaacgcttccatcgtcc
acagttccatctggcacccacctctccctggctgacctttgcgggtgctgtgcggtgaag
cggcagctgtggcagtacttcctcacaccgctggccgccgccatggcgagcgcagcggat
ggctgtgatgacgacgcgcctttcgcctcgcgcgatgcacagcagatgcaccggggagac
gccgaagcgcaggcgtgtggcacggctccttgcgatgcagtacacccaacgtcaacagca
gcgcccgtgccagcgccagcgccggtgtcggtgccattgcgacgagggacagcgcatgcg
agtgtccgcccatcacacggcatcctgttgcatgggccaagcggcacgggcaagacgagc
ctttgtctggcaacagcagccgccgcgggcctgaatgtgatccacgtgctcggctccaac
atccgctccaagattgttggcgagagcgaagctgccgtggccaaggtgttccgcgacgcc
gccaactgccgcccgtgtgttcttctcgtcgaccagctcgagtccatctgcggcaaacac
agcgaggacgatcgggcaagccagcggctgacggcggcgttcgttcgtgaacttgacgct
gtgcacgcaaatgctgacgcgtgggcgagcagcggtggcggtgtgtatgtgctggcaacg
acgcaggacgtcaactccatcgatccagttgtgctgcggcctggtcgtgtggagacgctg
gtgcggacaactattccgacagcagaggagcgtcgagaaatgctcgatgaattgatctgg
aacaccccactccagcttgaggatgacacgtttgagcttcgagatgatctcgttgacatg
actgcagggttttcgcatgctgagattgcgcaggtgtttcaggaggccggcatggctgcg
ctgcggcagtggccgcactttcacgatgcagacgacctccacgtccgcggcaggcacctc
atctcctgtgctcgcagcctcgcacaacagcagcactga

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