KEGG   Salpingoeca rosetta: PTSG_10752
Entry
PTSG_10752        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
sre  Salpingoeca rosetta
Pathway
sre03013  Nucleocytoplasmic transport
sre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTSG_10752
   03015 mRNA surveillance pathway
    PTSG_10752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_10752
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PTSG_10752
SSDB
Motif
Pfam: RRM_1 RRM_occluded Nup35_RRM_2 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 16069251
NCBI-ProteinID: XP_004988716
UniProt: F2UQ99
Position
Unknown
AA seq 328 aa
MGVSGSGRRRSYSRSRSRSPVRRGRRSISRSPRRGRRDSYANRRRRSYSRSTSRSRSPSR
SISRSRSRSRTPPRVAEEAKRKLYVGKLTGNVNSEHLKEIFSLYGRVVNIDMPTNRGGGS
RHFAYVEYDVPEDADKALEHMDGGQIDGQTIEVEHVNINRLMQRRERRGETKTGCPTVTA
HNLYNALAHHITIIITIIVTIMTMTIITIIVTIMTIITITITIIIIIIIVIMTIMTITII
RTDWTAAPAVPVAIAIAVHAPPPHPATQALTTTLLLLSSHTTTPHTTASLATAPPSWLII
VIVIRIVAIALTLSAQALGGTVMAAQIA
NT seq 987 nt   +upstreamnt  +downstreamnt
atgggtgtcagtggctccgggcgtcggcgcagctactccaggtccaggtcaaggagcccg
gtgaggcgtgggcgcaggtccatctccaggtcaccgcgccgaggccgccgcgacagctac
gccaatcgccgccgtcgctcgtactcccgctccacatcccgctctcgctccccatctcgc
tccatctcccgctcccgctcgcggtcgcgcacgccgccccgcgttgccgaagaggcgaag
cggaagctgtatgtgggcaagctcacaggcaacgtgaactcagagcacctcaaggagatc
ttctccctctacggccgtgtcgtcaacatcgacatgccaacgaaccggggcgggggttcg
cgccactttgcgtatgttgagtatgatgtgccggaggatgctgacaaggccctggagcac
atggacggcgggcagattgatggccagaccatcgaggtcgaacacgtcaacatcaacagg
ctgatgcaacgcagagagcgtcgaggtgagacgaagacgggctgtcccacggtcaccgct
cacaacctgtacaacgccctcgcccatcacatcaccatcatcatcaccatcatcgtcacc
atcatgaccatgaccatcatcaccatcatcgtcaccatcatgaccatcatcaccatcacc
atcaccatcatcatcatcatcatcatcgtcatcatgaccatcatgaccatcaccatcatc
aggaccgattggacggccgcgccggcggttccggtcgcgatcgcgatcgccgttcatgcg
ccgccgccgcaccccgccacgcaggcgctcaccaccacgctactcctcctctcgtcgcac
accaccacgccgcacaccaccgcgtcgctcgccaccgcgccgccgtcgtggctcatcatc
gtcatcgtcatccgcatcgtcgcgatcgcgctcacgctctccgcgcaggcgctaggcggc
accgtgatggctgcacagattgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system