KEGG T01799: SELR

Selenomonas ruminantium: SELR_04560

Entry

SELR_04560 CDS T01799

Gene name

dnaX

Definition

putative DNA polymerase III subunit gamma/tau (EC:2.7.7.7)

Orthology

K02343

DNA polymerase III subunit gamma/tau [EC:2.7.7.7]

Organism

sri Selenomonas ruminantium

Pathway

sri00230	Purine metabolism
sri00240	Pyrimidine metabolism
sri01100	Metabolic pathways
sri03030	DNA replication
sri03430	Mismatch repair
sri03440	Homologous recombination

Module

sri_M00260

DNA polymerase III complex, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:sri00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:sri00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:sri03030]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sri03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sri03440]

SSDB

Motif

Pfam:

DNA_pol3_delta2 DNA_pol3_gamma3 AAA TIP49 RuvB_N AAA_22 AAA_5 AAA_30 AAA_17 AAA_14 AAA_16 DNA_pol3_delta Mg_chelatase PIF1 T2SE AAA_18 AAA_24 SKI AAA_25 RNA_helicase Rad17 DUF815

Other DBs

NCBI-GI:

383753284

NCBI-GeneID:

12023461

UniProt:

I0GN27

Position

519198..520916

AA seq 572 aa
MAYIALYRKWRPKTFADLVGQEHISRTLSNAINTGRIGHAYLFSGPRGTGKTSTAKILAK
ALNCEQGPTPEPCGKCRACQKINDGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITV
EEIRGRLETVTAEMGLQVEPEALDMIAIQADGGLRDALSLLDQCSALADGELTAARVRQT
LGLIGHESIYRLTEAIYAHKSQTALAVLAELLRDGKELKQVLTELSLHLRSLMIYQSTGT
LEQMDLYAEPDEILQTQGKFFSAEEIMAMIKKLHEALAELKWSPQPRITVEVALLALCNP
ADSAVMPVQAAATAVDNGRLASLEAKLAQMAAQLAARPAAAPAQPAAKAAPQPPKRPMPA
AAPVQEVQAVPITASDAEVWEKLLQALKERKMPAFACVNQGQFAGMTETQFLVKFQGVLM
ADLAMRNYRSLIEEILQELTGRSLRLHCSGENTPAMPPPRPVPKKKTLPPPPPEEPVIHV
DLDSMPPEERAPLEKAFEIFGDHVVEIEEDNK

NT seq 1719 nt +upstreamnt +downstreamnt
atggcctatattgcactttatcgtaaatggcgtcccaagacctttgcggatctggtgggg
caggagcatatcagcaggacgctcagcaacgccatcaataccgggcggattggccatgct
tacttgttctcggggccccgggggactggtaagaccagtacggcgaaaattttggccaag
gcacttaactgtgagcaggggccaacgccggagccttgcggtaagtgccgggcctgtcag
aaaatcaatgacggttcctccatggacgtgttcgagatcgatgcggcttccaatcgcggt
atcgatgagattcgtgacttgcgggaaacggtgaagtttgcgccggtggatgggcgttac
aaggtctatatcatcgacgaagtgcatatgctgaccacagaggccttcaatgcgttgttg
aaaaccttggaagagccgcccgcccatgtggtattcatcctggcaacgacggaagcccat
aaggtgccgccaaccatccagtcccgctgtcagcgctatgattttaaacggatcaccgtg
gaggaaatccgtggccggttggagactgtcacggcggaaatggggctgcaggtggagccg
gaagccttggatatgattgccattcaggccgatggcggcctgcgcgatgctctgtcgttg
ctggatcagtgctccgcgttggcggatggcgaacttacggctgcccgggtgcggcagacc
ttggggcttatcgggcatgagtcgatctaccgcctgacagaagctatctatgcccataag
agtcagacggcattggcggtattggcggagcttctgcgggatggcaaggagctcaagcag
gtgctcacggagctgtcgctgcatctgcgcagtctgatgatttatcagtctacgggaact
ttggaacagatggatctgtatgccgagccggatgagattttgcagacgcagggcaagttc
ttcagtgccgaagagatcatggccatgatcaaaaaactccatgaggctctggcggagcta
aagtggtcgccacagccgcggattacagtggaggtagccctgctggcgctctgcaatccg
gcagatagcgccgttatgccggtgcaggcggcagcgaccgccgtggataatggacggctg
gccagcctcgaagccaagctggctcagatggccgcccagctggcggcccgcccggcggct
gcgcctgctcagcctgcggcaaaggccgccccgcagccgccaaagcgtccgatgcctgct
gccgcgcctgttcaggaggtgcaggccgtgcccatcacggccagcgatgcggaggtttgg
gaaaaacttctgcaggctttgaaggagcgcaagatgcctgcttttgcctgtgtgaatcag
ggacagtttgcgggcatgacggaaacgcagttcctggtgaagttccagggggtgctgatg
gcggatttggccatgcgcaactatcgttccttgatagaagagatattgcaggagcttaca
gggcgttccctgcgtctgcattgcagtggggagaatacgccggctatgccgccgccccgc
cctgtaccgaagaaaaaaacgttgccgccgcctccgccagaggagccggttatacatgtt
gatttggattctatgcctcccgaggagcgtgcccccttggagaaggcctttgagattttt
ggggaccatgtggtggaaatcgaggaggacaataaatga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (47)   

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