KEGG   Selenomonas ruminantium subsp. lactilytica: SELR_16050
Entry
SELR_16050        CDS       T01799                                 
Symbol
dacF
Name
(GenBank) putative D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
sri  Selenomonas ruminantium subsp. lactilytica
Pathway
sri00550  Peptidoglycan biosynthesis
sri01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sri00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SELR_16050 (dacF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sri01002]
    SELR_16050 (dacF)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sri01011]
    SELR_16050 (dacF)
Enzymes [BR:sri01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SELR_16050 (dacF)
Peptidases and inhibitors [BR:sri01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   SELR_16050 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:sri01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   SELR_16050 (dacF)
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Peptidase_S13 Beta-lactamase2 Beta-lactamase
Other DBs
NCBI-ProteinID: BAL83313
UniProt: I0GRC6
Position
complement(1676289..1677443)
AA seq 384 aa
MKVWQKIFSIFIGICMLVVQLPVAAGEGGEPDITAQAAIIIEASTGRVIWEKNADERLYP
ASMTKMMTGILALEQMNLRSDITMSSAAAHTESSPLGVLTGERIRTDELLNGMLLESDNG
AAVALAEAMAGNVQSFAGIMNGKAAELDMKDTHFVNPNGLTEAGHYSTARDMAKLARYAM
QNKAFREIVEQPQRVIRWESPKNKSFQAHNTNKLLGKYTGMTGIKTGWTQAAGGCLAAGA
KRNGVELIVVLMKAPTLDDRFTDAAKLLDYGFEHVKITKALSRERVSRRAWVTNGQQASV
DLYPARDINFPLINGEDKSHYSLVYHVPKVVEAPLKAGTPVGQIVVRYNGQDVEHVDMLA
ENVNSGFSFGSFFVKMFSWVLKLV
NT seq 1155 nt   +upstreamnt  +downstreamnt
ttgaaagtatggcaaaagattttctcgatatttattggcatatgtatgttggtggtgcag
ctgccagtggcggctggtgagggtggtgagccggacatcacggcgcaggccgccatcatc
atcgaggcgtccacggggcgtgtgatctgggagaagaacgccgacgagcgtctctatccg
gccagcatgaccaagatgatgacgggaatactggccctggagcagatgaatctgcgttcc
gatatcactatgtccagtgcggcggcgcatacggaatcttcgcccttgggcgtgttgaca
ggagagcggattcgtactgatgaactcttgaacggaatgttgctggaatctgataacggg
gcggcggtggccttggcagaagctatggccggcaatgtccagtcctttgccggtatcatg
aatggcaaggcggcagaactggatatgaaggacacgcattttgtcaatcccaacggactg
acggaggccggtcattattctacggcccgggatatggccaagctggcccgctatgccatg
cagaataaggcctttcgggaaatcgtggagcagcctcaacgggtaatccgttgggagtca
ccgaagaataaatccttccaggcccataataccaataaactgttgggtaaatatacgggt
atgaccggcatcaaaactggctggacgcaggcggcaggcggctgtctggctgcaggggcc
aaacgcaatggcgtggaattgattgtggtgctgatgaaagcgcccacattggatgaccgt
ttcacggatgcggccaaacttcttgattacggctttgagcatgtgaaaataaccaaggcc
ctctccagggagcgggtgagccgcagggcctgggtgaccaatggccagcaggcttcggtg
gatctgtatcccgcccgggatatcaatttcccgttgatcaatggcgaggataagagccat
tattccctggtctatcatgtgcccaaagttgtagaggctccattgaaggcaggtacgcct
gtggggcagatcgtagttcgctataacggacaggatgtggagcatgtggacatgctggca
gagaacgtgaatagcggtttcagtttcggctctttctttgtgaagatgttttcctgggta
ttgaaattggtataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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