KEGG   Serratia plymuthica 4Rx13: SOD_c24490
Entry
SOD_c24490        CDS       T02710                                 
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
  KO
K03578  ATP-dependent helicase HrpA [EC:3.6.4.13]
Organism
srl  Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:srl00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    SOD_c24490 (hrpA)
SSDB
Motif
Pfam: DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_19 T2SSE nSTAND3 NACHT PhoH ResIII AAA_16 AAA_23
Other DBs
NCBI-ProteinID: AGO55423
Position
complement(2747445..2751332)
AA seq 1295 aa
MKSPLAASSAQLGELMLRDQQRLQRRLQGARKIKNPDAQQAAVAEVESDIAAALQKVQAR
AASCPKITYPENLPVSQKKQDILNAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVKGL
IGHTQPRRLAARTVANRIADELETPLGGSVGYKVRFNDQVGENTLVKLMTDGILLAEIQQ
DRLLMQYDTLIIDEAHERSLNIDFILGYLRELLPKRPDLKVIITSATIDPQRFSRHFNHA
PIIEVSGRTYPVEVRYRPVVDDAEDTDRDQLQAIFDAVDELGREGPGDILIFMSGEREIR
DTADALNRLDLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVI
DPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSDGICIRLYSEQDFLSRPEFT
DPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNILDGVRLLEELGAIKTAENGHYQ
LTPQGRQLAQLPIDPRLARMVLEAQKSGSVREVMIITAALSIQDPRERPMDKQQASDEKH
RRFADKDSDFLAYVNLWDYLKEQQKEHSSGQFRRLCRNDFLNYLRVREWQDIYTQLRQVV
KELGLPVNSEPSDYRSVHTALLTGLLSHIGQKDADKQEFTGARNARFSIFPGSGLFKKPP
KWTMVAELVETSRLWGRIAARIEPEWIEPLAQHLVKHSYSEPHWSKSQGAVMASEKVTLF
GLPIVAARPVNYSTIDPLLCRELFIRHALVEGDWQTRHAFFSANLKLRAEVEELEHKSRR
RDILVDDETLFSFYDQRIPSDVVSGRHFDNWWKTAGKQKPDLLSFEKEMLIKDGANKVSA
LDYPNAWHQGNLKLRLTYQFEPGTDADGVTVHIPLPILNQIEDRGFEWQIPGIRRELVIA
LIKSLPKPVRRNFVPAPNYAEAFLGRVTALELPLLDALERELRRMTGVTVSRDDWHWDQV
PDHLKMTFRVVGENHKTLLEGKDLTALKLQLKDKVQETLSAVADDGLEQSNLHIWSFGKL
PEFYEQKRGGYSMKAYPALVDEKDSVAIRLFDSEQEQQQAMWQGTRRLLLLNIPSPIKYL
HEKLPNKAKLGLYFNPYGKVLDLIDDCISCGIDKLIAEHGGPVWQEDNFARLQELVRGEL
NETVVGVAKQVEQILTTVFNINKRLKGRVDMSLALALSDIKTQLGGLIYRGFVTNNGWKR
LPDTLRYLQAIERRLEKLAIDPHRDRAQMLRVDQVQQAWQQWLNKLPPKRRQDDEVKEVR
WMIEELRVSLFAQQLGTPYPISDKRILQTIEQLSA
NT seq 3888 nt   +upstreamnt  +downstreamnt
gtgaaatctccgctcgcggcatcctctgcccaactgggcgaactgatgctccgtgatcaa
caacgcctgcaacgtcggttgcagggcgcacgaaaaatcaaaaatcccgatgctcagcag
gcggccgtcgctgaagtagaaagtgacattgcggcggcattgcagaaagtgcaggcgcgc
gccgcctcttgcccgaaaatcacctatccggaaaacctgccggtcagccagaaaaagcag
gatatcctgaacgcgatccgtgaccatcaggtagtgattgtcgccggggaaaccggttcg
gggaaaaccacccagttgccgaagatctgcctggaactggggcgtggggtgaaggggctg
atcggccatacccagccacggcgcctggcggcgcgcaccgtagcaaaccgcattgccgat
gagctggaaacgccgctcggcggtagcgtcggttataaggtgcgctttaacgatcaggtc
ggggaaaatacgctggtcaagctgatgaccgacggtattttgctggcggaaatccagcag
gacaggctgctgatgcagtacgacacgttgattatcgatgaagcgcacgaacgcagcctg
aacatcgactttatcctcggttatctgcgcgaactgttgccgaagcgcccggatctgaaa
gtcatcattacctcggcaaccatcgatccgcagcgtttttcgcgccatttcaatcacgcg
ccgattatcgaagtttctggccgcacttatccggtcgaggtgcgttatcgcccggtggtg
gacgacgccgaggataccgatcgcgatcaactgcaggcgattttcgacgcggtggatgaa
cttggtcgcgaagggcccggggatatcctgatctttatgagcggcgagcgtgaaattcgc
gataccgccgatgcattgaaccgtcttgatttaccgcataccgaagtattgccgctgtat
gcgcggttatcgaacagcgaacaaaaccgggtgttccagtcgcatcatggccgccgcatt
gtgttggcgaccaacgtggcggaaacctcgctgacggtgccgggcatcaagtatgtcatc
gatccgggcaccgcacgcatcagccgctacagtttccgcaccaaggtccaacgcctgccg
atcgagccggtgtcgcaggcttccgccaaccagcgtaagggccgctgtggccgcgtgtcg
gacggtatctgtatccgcctgtactccgaacaggatttcctgtcgcggccggagtttacc
gatccggaaatcctgcgcaccaacctggcgtcggttatcttgcagatgacgtcgctcggg
ctgggggatatcgccgcattcccgtttgtcgaagcgccggacaagcgcaatattctggac
ggcgtgcgccttttggaggagttgggagcgattaaaacggctgaaaacggccattatcag
ctcaccccgcagggccgccaactggcgcagttgcctatcgatccgcgcctggcgcgcatg
gtgctggaagcgcaaaagagcggcagcgtgcgtgaggtgatgatcatcactgccgcgctg
tcgatccaggatccgcgagagcggccgatggacaagcagcaggcgtcggacgagaaacac
cgtcgcttcgccgataaagactcggacttcctggcctacgttaacctgtgggactacctg
aaagagcagcaaaaagagcactcctccggccagttccgccggctgtgccgcaatgatttc
cttaactacctgcgggtgcgtgaatggcaggatatctacacccaactgcgccaggtggtg
aaagagctggggctgccggttaacagcgaaccttccgattaccgcagcgtgcataccgcg
ttgctcaccgggttgctgtcgcacattggccagaaggatgccgacaagcaagagttcacc
ggagcccgcaacgcccgtttctcgatcttcccaggctccggcctgttcaagaagccgccg
aaatggacgatggtagcagaactggtggaaaccagccgcctgtggggccgcatcgccgcg
cgcatcgagcctgagtggattgaaccgctggcccagcatctggtgaagcacagttacagc
gaacctcactggtccaaatcccagggcgcggtgatggccagcgaaaaagtgacgctgttt
gggctgccgattgtcgccgcgcggccggtcaattacagcactattgatccgctgctgtgc
cgtgagctgtttatccgtcatgcactggtggaaggcgactggcagacgcggcatgcattc
ttcagcgccaacctgaagctgcgtgccgaggtggaagagctggaacataaatcgcgccgc
cgtgacattctggtggatgacgagactttgttcagtttctacgaccagcgcattccgagc
gatgtggtgtccgggcgtcattttgacaactggtggaaaaccgccggtaaacaaaagccg
gacctgctcagttttgaaaaagagatgctgatcaaggacggcgccaacaaggtcagcgcg
ctggactacccgaacgcctggcaccagggcaatctcaaactgcgcctgacttaccagttt
gaacctggcaccgatgccgatggcgtcacggtccatattcctctgcctattctcaatcag
attgaagatcggggtttcgaatggcagatcccggggattcgccgtgagttggtgattgcg
ctgatcaagtcgctaccgaagccggttcgccgaaactttgtgccggcgccgaactacgcc
gaggcgttcctcgggcgggtgaccgcgctggagttgccgctgctggatgcgctggagcgt
gaattgcggcgcatgactggcgtgacggtgtcacgagacgactggcactgggatcaggtg
cccgatcatcttaaaatgacgttccgtgtggtgggtgaaaatcacaaaaccttgctcgaa
ggcaaagatctgacggcgctgaagctgcaattgaaggacaaagtgcaggagacgctgtcg
gcggtggcggatgatgggctggaacaaagcaatttgcatatctggagcttcggcaaactg
cccgagttttatgagcagaaacgcggcggctactcgatgaaagcctacccggcgctggtg
gatgaaaaagacagcgtggcgatccgcctgttcgacagcgagcaagagcagcaacaggcg
atgtggcagggtacgcgccgcctgttgttgctgaatatcccatcgccaatcaagtatctg
catgaaaaactgcccaacaaagccaagctggggctgtattttaacccttatggcaaggtg
ttggatctgatcgacgattgcatctcgtgcggtatcgacaagctgatcgccgaacatggc
gggccggtatggcaggaagataacttcgcacgcttgcaagagttggtgcgcggcgagctg
aatgaaaccgtggtgggggtagccaagcaggtcgagcagatcctgaccacggtattcaac
atcaacaagcggctgaagggccgggtggacatgtcgttggcgctggcgctctcggatatc
aaaacccagcttggtggcctgatttatcgcgggttcgtcaccaacaacggctggaagcgc
ctgccggatacgctgcgttatttgcaggcgattgaacgccggctggagaagctggcgatc
gatccgcaccgcgatcgcgcgcagatgctgcgggtggatcaggtgcagcaggcgtggcaa
cagtggctgaacaagctgccgccgaaacgtcggcaggatgacgaggtgaaagaagtgcgc
tggatgatcgaagagctgcgcgtcagcctgttcgcccagcaactcggcacgccttatccg
atttcggacaaacgtatcttgcagactatcgagcagctttcggcctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

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