KEGG   Serratia plymuthica 4Rx13: SOD_c37900
Entry
SOD_c37900        CDS       T02710                                 
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase RppH
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
srl  Serratia plymuthica 4Rx13
Pathway
srl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOD_c37900 (rppH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srl03019]
    SOD_c37900 (rppH)
Messenger RNA biogenesis [BR:srl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SOD_c37900 (rppH)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AGO56742
Position
complement(4268703..4269230)
AA seq 175 aa
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAVTVMPMQEQATQRQPPAYRRKRG
NT seq 528 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtcagggg
caggtcctttgggctcgccgttacggtcaacactcctggcagtttccccaaggtgggatt
aaccctggcgaaaccgcagaacaggcaatgtaccgtgagctgttcgaagaagtggggctg
agcaaaaaggatgtgcgcatcctggcctcaacccgcaactggttgcgctataaattgcca
aaacgtttggtgcgttgggacacaaagccggtatgtatcggccaaaagcagaaatggttt
ttgttgcagttaatgtgcaatgacgcggatatcaatatgcaacgcagtagcacgccggag
tttgacggctggcgctgggtgagtttttggtatccggtacgccaggtggtgtcgttcaaa
cgcgacgtttaccgccgggtgatgaaagaattcgccgtcaccgtgatgccgatgcaggag
caggcaacacagcggcagccccccgcctatcgccgaaagagaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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