KEGG   Salinibacter ruber M8: SRM_01510
Entry
SRM_01510         CDS       T01209                                 
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease, ATPase subunit
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
srm  Salinibacter ruber M8
Brite
KEGG Orthology (KO) [BR:srm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:srm03110]
    SRM_01510 (clpC)
Chaperones and folding catalysts [BR:srm03110]
 Heat shock proteins
  HSP100
   SRM_01510 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 AAA_16 Sigma54_activat AAA_22 nSTAND3 IstB_IS21 RuvB_N UVR AAA_18 AAA_14 ATPase_2 Zeta_toxin AAA_3 ResIII AAA_7 TniB TsaE ABC_tran PhoH bpMoxR DNA_pol3_delta2 KTI12 Torsin AAA_25 AAA_19 CLP1_P DUF348 DUF87
Other DBs
NCBI-ProteinID: CBH24431
UniProt: D5H8S6
Position
complement(1720929..1723556)
AA seq 875 aa
MEGNFSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELK
EAVEDTVRSTSSSTSVGNIPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENI
AAQILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTPV
LDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLA
ARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDNDDIILFIDEIH
TIVGAGGASGSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDPS
TPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGARV
HLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAARLRDKEKTLQEELEEAKQQWHE
QAETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLSK
AIRRTRAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKFS
VSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGILTDG
MGREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNPE
FLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQKY
GARPLRRALQKYVQDPMAEDILHDEITEGDTVLITHDGESEELSFEVEEGEAPTEETPTD
ANGEANSVSAEEVAEGASTDENGSGEEPSTASDEE
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggaaggcaatttctcaaatcgcgtccgggacgttatttcctacagccgcgaagaggcg
gtgcgactcgggcacgattacatcggtacggagcacctcttgcttgggctcatccgggaa
ggcgacggaatcgcggtgaagattctccgcaacctcgggtgtgacctgttggagctcaag
gaggccgtggaggacacggtccgaagcaccagcagctccacctcggtggggaacatcccc
cttaccaagcaggccgagaaggtgctcaagattacgtacctggaggcgaagctctacaag
agcgacgtcattgggacggagcacctcctcctgagcctgctccgggacgatgagaacatc
gccgcgcaaattctccaacaaggcttttcagtaacgtacgacgccgtgagaaacgagcta
gactccattattagtggcaaggcctcttcctcttccagcggcagcggtggatccggcggt
cgtctctcctccggctacgggcaggagagcagcgagtcggagaacagcaacacgccggtc
ctggacaacttcggccgggacctgacggagctggcggaggaggatgaactcgatcccatc
atcgggcgcgaggaagagatcaagcgtgtcgcccagatcctgagccgacgcaagaagaac
aacccggttctcattggggagccgggcgtcgggaaaaccgccatcgcggaggggcttgcc
gcgcggatcgtggatcgcaaggtcagccgcgtgctctacgacaagcgcatcgtcacgctc
gaccttgcctccctcgtggccggcaccaagtaccggggccagttcgaggagcggatgaag
gccgtgatgaaggagctggaggacaacgacgacatcatcctcttcatcgacgagatccac
accatcgtcggggccggcggggcgtccggcagcctggacgcgtcgaacatgttcaagccc
gcgctcgcccgcggcgacttgcagtgcatcggggcgaccacgctcgacgagtaccgccaa
aacattgagggcgacggcgcgctcgaccgccgctttcagaagattatcgtcgacccgtcg
acgcccgaggagacggtcaacatcctctcgaacatcaagtcctactacgaggaccaccac
aacgtccgcttctccgaggaggcgatcgacctggcggtccagttgagcgaccgctatatc
accgatcgcttcctgccggacaaggccatcgacgtgatggacgaggccggcgcgcgggtt
cacctctccaacatcgaggtcccgcccgagattctggagcttgaggagcagatcgaggat
gtccaggaggagaaaaaccaggtcgtcaagagccagcggttcgaagaggcggcccgcctc
cgcgacaaggagaagacgcttcaggaggaactggaggaggccaagcagcagtggcacgag
caggccgagaccgaagtccacgacgtcacctcggaggagatcgccgaagtggtggccatg
atgacgggcattccggtcgacaagatcagcgagccggagcagcagaagctcctcaagatg
gaggagtcgctcaaggagcacgtggtgggacaggacgaagccatcgagaagctgtcgaag
gccatccgtcgcacccgtgccggcctgaaggacccggagaagcccattggttccttcatt
ttcctcgggcccaccggcgtcggcaagaccgagctggccaaggttctcaccgagtacctc
ttcgactcgcaggagtcgctcatccggatcgacatgagcgagtacatggagaagttctcc
gtcagccgactcgtgggggccccgccgggatacgtgggccacgaggaaggcggccagctg
accgagaaggtgcgccggaagccgtactccgtggtcctgctcgacgagattgagaaggcc
cacccggatgtctccaacatcctcctgcaggtcctggacgatgggatcctgaccgacggc
atggggcgggaggtcgacttccgcaatacgatcctcatcatgacctccaacatcggcacg
caggacatcaagtccttcggccaggggattgggttcgaccagacggacggggaagacatg
gactacacgtccatgaagtccaccgttcaggacgccctcaagaacgtcttcaacccggag
ttcctgaaccggctcgacgacgtgatcgtcttcaacccgctcaacaaggagaacatcttc
gacatcatcgacatcatgtcggaggatctcttcgagcgggccgaggagcttggcctcgac
ctcgagttcgacgaggccgccaaggaattcctaacggaccgcgggttcgaccagaagtat
ggcgcccggccgctccgcagggcccttcagaagtacgtgcaggacccgatggccgaagac
atcctccacgacgagatcacggagggcgacacggtcctcatcacgcacgacggcgaatcg
gaggagctgtccttcgaggtcgaggagggcgaggccccgacggaggagaccccgacagac
gcaaacggagaggccaacagcgtctccgccgaagaggttgccgagggcgcgtccaccgac
gagaacggatccggtgaggagccctcaacagcttccgacgaggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (40)   

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