KEGG T01137: Sros

Streptosporangium roseum: Sros_4487

Entry

Sros_4487 CDS T01137

Definition

exodeoxyribonuclease V (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sro Streptosporangium roseum

Pathway

sro03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sro03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 HHH_5 Viral_helicase1 AAA_11 HHH Helicase_RecD PIF1 PhoH AAA_22 HHH_2 AAA_10 AAA_16 UvrD_C HHH_3 TrwB_AAD_bind AAA AAA_28 DAP3 AAA_12 AAA_29 DUF2075 DUF258

Other DBs

NCBI-GI:

271965900

NCBI-GeneID:

8667781

UniProt:

D2B1Q1

Position

complement(5003625..5005841)

AA seq 738 aa
MKPGSGGPSAASIDAVLERITYANEETGYTIARVATERSGSDLLTVVGPLLGAQPGESLR
LTGRWTSHPKYGKQFEVWSYATVLPATVQGIQRYLGSGLIKGIGPKMAERIVDHFGADTL
QIIETAPERLVEVPGLGPKRTKMIGIAWEEQKIIKEVMIFLQGVGVSTSIAVRIFKQYGD
ASITVVKSEPYRLADDVWGIGFKTADTIAQAVGIPHDSPERVKAGLRYTLSQAADDGHCY
LPAPNLVADAVKILEVPAELTVRCLEELVAEEGVVREEVPAGDSLVPAVYLVPFHRAELS
LAGSLRALLTSGHDRLGVFGSVDWQVALEWLHKQTDAELAPEQAHAVRLALCEKVAVLTG
GPGCGKSFTVRSIVTLARAKKAKVILAAPTGRAAKRLAELTGHEATTVHRLLQLRPGGDA
TFDRDNPLDADLVVVDEASMLDLLLANKLVKAIAPGTHLLFVGDVDQLPSVGAGEVLRDL
LAAEEEIPRVRLTHIFRQAQESGVVVNAHRVNTGLPPALEGMGDFFLFPCEEPEEIAALT
VDVVANRIPRKFGLNPRRDVQVLAPMHRGAAGAGNLNNALQEALTPSREGMPERRYGGRV
YRVGDKVTQLRNNYDKGAAGVFNGTVGVVVDIKPDDHKLTVLTDEDENVEYAFDELDELA
HAYAVSIHRSQGSEYPAVVIPLATSAWMMLQRNLLYTAITRAKKLVVIVGSRRALAQAVR
TRGAGRRHTSLTHRLRSP

NT seq 2217 nt +upstreamnt +downstreamnt
gtgaagcctggatcgggtggtccctctgccgcgtccatcgacgccgtcctcgaacgcatc
acctacgccaacgaggagaccggctacaccatcgccagggtggccaccgaacgctcgggc
agcgatctgctgaccgtcgtcgggccgctgctgggcgcccagcccggcgagtcgctgcgg
ctgaccgggcgctggacctcccatcccaagtacggcaagcagttcgaggtatggtcctac
gccaccgtgctgcccgccaccgtccagggcatccagcgctacctcggctccgggctgatc
aagggcatcgggccgaagatggccgagcggatcgtcgaccacttcggcgccgacaccctg
cagatcatcgagaccgcccccgagcggctggtcgaggtccccggcctcggccccaagcgg
accaagatgatcggcatcgcctgggaggaacagaagatcatcaaagaggtgatgatcttc
cttcagggagtcggcgtctcgacctccatcgcggtgcggatcttcaagcagtacggcgac
gcctccatcacggtcgtcaagagcgagccctaccggctggccgacgacgtgtggggcatc
ggcttcaaaaccgccgacaccatcgcccaagccgtcggcatcccgcacgacagccccgaa
cgggtcaaggcgggcctgcgctacaccctgtcgcaggcggccgacgacggccactgctac
ctgccggcccccaacctcgtcgccgacgcggtgaagatcctggaggtcccggccgagctg
accgtccgctgcctggaagaactggtcgccgaggagggcgtggtccgcgaggaggtcccc
gccggcgacagcctcgtccccgcggtctacctggtccccttccaccgcgccgagctgtcg
ctggccggctccctgcgcgccctgctgacctccggccacgaccggctgggcgtcttcgga
tcggtggactggcaggtggcgctggaatggctgcacaagcagaccgacgccgagctcgcc
cccgagcaggcccacgccgtacggctggcgttgtgcgagaaggtcgcggtgctgaccggc
gggcccggctgcggcaagagcttcaccgtgcgctccatcgtcaccctcgcgcgcgccaag
aaggcgaaggtcatcttggccgcgcccaccggccgggcggccaagaggctcgcggagctg
accggccacgaggccaccaccgtgcaccggctgctgcaactgcgccccggcggggacgcc
accttcgaccgcgacaaccccctggacgccgacctggtcgtggtcgacgaggcctcgatg
ctggacctgctgctggccaacaaactggtcaaggccatcgcgccgggcacgcacctgttg
ttcgtgggggatgtggaccagctgccctcggtcggcgccggcgaggtgctgcgggacctg
ctggccgccgaggaggagatcccccgggtacggctgacccacatcttccgccaggcacag
gagtcgggcgtggtcgtcaacgcccaccgcgtcaacaccggcctgcccccggcactggag
ggcatgggcgacttcttcctgttcccgtgcgaggagccggaggagatcgcggcgctgacc
gtcgatgtggtggccaaccggatcccgcgcaagttcggcctcaacccgcgccgggacgtg
caggtgctggcgccgatgcaccggggcgccgcgggggcgggcaacctcaacaacgcgctg
caggaggcgctgaccccctcgcgcgagggcatgcccgaacgccgctacggcggccgtgtc
taccgggtcggcgacaaggtgacccagctgcgcaacaactacgacaagggcgcggcgggg
gtgttcaacgggaccgtgggcgtggtggtcgacatcaaacccgacgaccacaagctgacc
gtgctgaccgatgaggacgagaacgtcgaatacgccttcgacgagctggacgagctggca
cacgcctacgcggtgtccatccaccgctcccagggcagcgagtatccggcggtggtcatc
ccgctggccaccagcgcgtggatgatgctgcagcgcaacctgctctacaccgcgatcacc
cgggccaagaagctcgtcgtcatcgtcggctcacgccgggcgctggcccaggcggtgcgc
acccgcggcgccggacggcgtcacaccagcctcacccaccggctgcgctcgccttag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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