KEGG   Serratia plymuthica AS9: SerAS9_3368
Entry
SerAS9_3368       CDS       T01503                                 
Name
(GenBank) endonuclease 4
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
srr  Serratia plymuthica AS9
Pathway
srr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SerAS9_3368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srr03400]
    SerAS9_3368
Enzymes [BR:srr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     SerAS9_3368
DNA repair and recombination proteins [BR:srr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SerAS9_3368
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AEF46478
Position
3591939..3592778
AA seq 279 aa
MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLPAEVIDKFKSACAQYG
YGPGQILPHDSYLINLGHPVTEALEKSREAFLDEMQRCEQLGLTLLNFHPGSHLMQIDED
KCLARIAESINIVLDKTVGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTKETCEQTFKVLGDVVGFNYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG
KTVFSYIMSDSRFDNIPLILETVNPDIWAEEIAWLKAQQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcgcacgaattagaggcgaccgcgttcgccctgttcaccaaaaatcagcgtcaatggaag
gccgcaccgctgccggcagaggtgattgataaattcaaaagcgcctgcgcacagtacggt
tacggcccagggcaaatcctgccgcacgacagctacctgatcaatctcggccacccggtg
accgaagcgttggaaaaatctcgcgaggcgtttctggatgaaatgcagcgctgcgaacaa
ctcgggctgacgctgttgaacttccaccccggcagccatctgatgcagattgatgaagac
aaatgcctggcgcgcattgctgaatccatcaacatcgtgctggataaaaccgtcggcgtg
acggcagtgattgagaacaccgccggccagggcagcaatctgggcttcaggttcgaacat
ctggcggcgatcattgacggcgtggaagacaaaagccgtgtcggcgtgtgtatcgatacc
tgccatgcctttgccgccggttacgatctgcgcaccaaggaaacctgcgagcagaccttt
aaagtgctgggtgacgtggtgggcttcaactacctgcgcggcatgcacctgaacgacgcc
aagagcgcgttcggcagccgtgtcgatcgccatcacagcctgggtgaaggcaatatcggc
aaaacggtcttcagttacatcatgagcgactcgcgtttcgacaatatcccgctgattctc
gaaaccgtgaacccggatatctgggcggaagaaatcgcctggctgaaagcgcaacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system