KEGG   Serratia plymuthica AS9: SerAS9_4936Help
Entry
SerAS9_4936       CDS       T01503                                 

Definition
fomramidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
srr  Serratia plymuthica AS9
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:srr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SerAS9_4936
Enzymes [BR:srr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SerAS9_4936
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SerAS9_4936
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5341877..5342686)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDRPVRSVQRRAKYLL
IELDHGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCEDL
ANSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPDRPAGSLSKTEAELLVETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESAKHGQRSTFFCRRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgagaccagccgacgtggtattgaaccttatcttgtcggc
catagcattcagtatgcggtggtgcgcaacgcgcggctgcgctggcctgtttccgagcaa
attctggcgctgagcgaccggccggtacgcagcgtgcaacgccgcgccaagtatctgctg
attgaactggaccacggctggattatcgtccatttggggatgtccggcagcctgcgtatg
ctggccgaggaaaccgaagccgggaagcacgaccatgttgatctggtgatcagcaacggc
atgacgctgcgttataccgatccccgtcgttttggcgcctggctgtggtgcgaagatttg
gcgaacagcaatgtgctggcccaccttgggccggaaccgctaagtgaagcctttactggc
gcctacctgtacgaaaagtcacgcaataagcgcacgttgatcaaaccctggctgatggat
aacaagctggtcgtgggggttggcaatatctacgccagcgaatcactgtttaccgccggg
atcctgcccgatcgcccggccggttcgctgagcaaaacggaagctgagctgctggtggaa
accattaaagcggtattgctacgctcgattgagcaaggtggcaccacgctgcgcgatttc
ctgcagtcggacggtaaaccgggctatttcgcgcaagaattgcaggtgtatggtcgtgcg
ggggagccttgccgcgcgtgcggcacgccgattgaatcagctaaacacgggcagcgcagc
accttcttctgccgccgctgccaacgctga

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