KEGG T01502: SerAS12

Serratia sp. AS12: SerAS12_0409

Entry

SerAS12_0409 CDS T01502

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

srs Serratia sp. AS12

Pathway

srs00020	Citrate cycle (TCA cycle)
srs00620	Pyruvate metabolism
srs00630	Glyoxylate and dicarboxylate metabolism
srs00680	Methane metabolism
srs01100	Metabolic pathways
srs01110	Biosynthesis of secondary metabolites
srs01120	Microbial metabolism in diverse environments

Module

srs_M00009	Citrate cycle (TCA cycle, Krebs cycle)
srs_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srs_M00012	Glyoxylate cycle
srs_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:srs00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:srs00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:srs00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:srs00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C NAD_binding_10 Semialdhyde_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

457422..458360

AA seq 312 aa
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALHGADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIQQVATTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTSLDIIRSNTFVAELKGKQPEELNVPVIGGHSGV
TILPLLSQIPGVSFTDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEKGVVECAYVEGDGKYARFFAQPLLLGKNGVEERKDIGTLSAFEQKALEEMLDVLH
KDIELGEKFINN

NT seq 939 nt +upstreamnt +downstreamnt
atgaaagttgcagttctcggtgctgctggcggtatcggccaggccctcgcccttctactc
aaaacccagcttccttcaggttctgaactctctctctacgacattgcccccgttacccca
ggcgttgccgtcgacttaagccacatccctaccgcagttaaaatcaaaggcttcagcggc
gaagatgctactccagctctgcatggtgccgacgtagtgctgatttctgctggcgttgcg
cgtaaacctggtatggatcgttcagatctgttcaatgtcaacgcaggcatcgtgcgtaat
ctgatccagcaagtggcaacaacctgcccgaaagcttgcatcggcattatcaccaaccca
gtaaacaccaccgtggcaatcgcggcagaagtgctgaagaaagccggtgtttatgacaaa
aacaaactgtttggcgtgacctcgctggatatcatccgttccaacaccttcgtggctgag
ctgaaaggcaaacagccggaagagttgaacgtgccggttatcggcgggcattctggcgtg
accattctgccactgttgtcacagatcccgggcgtgagctttaccgaccaggaagtggcg
gatctgaccaagcgtatccagaatgcgggtactgaagtggttgaagccaaagccggcggc
gggtccgcaactctgtcaatgggtcaggcggcggcgcgtttcggtctgtctctggttcgt
gcgctgcaaggtgaaaaaggcgtggtggaatgcgcttatgtggaaggtgacggcaaatat
gcccgcttcttcgcacaaccgctgctgctgggcaaaaacggcgtagaagaacgtaaagac
atcggtactctgagcgcgttcgagcagaaagcgttggaagagatgctggatgttctgcat
aaagatatcgagctgggcgaaaagtttatcaataactga

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SRS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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