KEGG   Segniliparus rotundus: Srot_2295
Entry
Srot_2295         CDS       T01238                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
srt  Segniliparus rotundus
Pathway
srt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:srt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Srot_2295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srt03021]
    Srot_2295
   03400 DNA repair and recombination proteins [BR:srt03400]
    Srot_2295
Enzymes [BR:srt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Srot_2295
Transcription machinery [BR:srt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Srot_2295
DNA repair and recombination proteins [BR:srt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Srot_2295
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ADG98745
UniProt: D6ZAK9
Position
complement(2329960..2330229)
AA seq 89 aa
MSEALVFDPPQGITNPPIDELLEHVSSKYALVIYGAKRARQINDYYTQLGEGLFDYVGPL
VEPGLQEKPLAIALREIHEGLLEHNEAQV
NT seq 270 nt   +upstreamnt  +downstreamnt
atgagcgaagcgctcgttttcgacccgccgcagggcatcaccaacccgccgatcgacgag
ttgctcgagcacgtctcctccaagtacgccctggtgatttacggcgccaagcgcgcccgc
cagatcaacgactactacacccagctcggggagggccttttcgactatgtcggcccgctg
gtcgagcccggccttcaggagaagccgctcgccatcgccctgcgtgagatccacgaaggg
cttttggagcacaacgaagcccaggtctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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