KEGG   Salinibacter ruber DSM 13855: SRU_0132
Entry
SRU_0132          CDS       T00312                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sru  Salinibacter ruber DSM 13855
Pathway
sru00230  Purine metabolism
sru00240  Pyrimidine metabolism
sru01100  Metabolic pathways
sru01232  Nucleotide metabolism
Module
sru_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sru_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sru00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SRU_0132
   00240 Pyrimidine metabolism
    SRU_0132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sru03400]
    SRU_0132
Enzymes [BR:sru01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SRU_0132
DNA repair and recombination proteins [BR:sru03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SRU_0132
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN Intein_splicing
Other DBs
NCBI-ProteinID: ABC46061
UniProt: Q2S696
Position
174757..177555
AA seq 932 aa
MSTTTRSRSSTSADFGWLNDEARTFLRRGYLLEGTGPEDRVREIAEHAEGLLEMDGFADR
FYEYMARGYYSLASPVWANFGLDRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVGGGTS
GYFGDVRPRGASITNNGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHPDVEEW
LNIQTEGDAIQTMMYGVVVGDDWMEAMIDGDSDKRALWAKVVESRMNLGIPYILFRGNVQ
DGRPQVYKDKGYDVHASNLCLTGDQRVVTDRGYKRAEDLWEEGGELTLFDGEDAIGSSRM
KLRKTSAEVYKITLGNGVEQKVSARHGMPVYQGKSEYKRTEAQNVEVGDRIVIQKQKGLF
GDRHCPDEAFILGMWQSDGTQAGDEKFIDIWEKDFDLAEEIQEKMDRIYNRHGFNEYELT
NQHGGTFTRDRETPQLREVDAGHSNDRKKRLQTRALTKLGFEKGTVPEWIYEADEETVWA
YVRGLLVADGTAHVSYSKGNPLQIAYADVDRDFLQELQLLFNNLGLSAQIRSLRDGNEAL
LPDGNGGEKLYETQNCYRLIVGNKAAALEIERNTGFLTRKDIELEERSYRDNTKKAYKVV
DIEHVGQETVYCPTTHTEESVFVSQGALTFNCSEIALPSGPDESFVCCLSSMNALHYDDW
KDTDAVETLTQFLDAVMQEFIDGAKGMAHMDRAVRFAERHRAIGIGILGWHSYLQSNRIP
FESAEASLTGAEIAKTIKERSYAASAELADRFGEPPVLEGYGRRNATTMAVAPTKSSSFI
LGQVSPSIEPIKSNYFVQDRAKMKVTYKNPHLQALLQEKGRDTDAVWDEIALRDGSVQHL
DFLSDEEKDVFKTFSEISQMAIIDQAAGRQKHIDQSQSLNLAIDPGSTPVKDINRLYVEA
WKKGVKSLYYQHGVNAAQSFSRDLLACKACEA
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgtccaccacgacccgttcccgctcctcaacctccgcggacttcggctggctcaacgac
gaggcccgcaccttcctccgacgggggtatctcctggagggcaccggcccggaggaccgc
gtgcgagaaattgccgagcacgccgagggcctcctcgagatggacggctttgccgaccgg
ttctacgaatacatggcgcgcggctactactcgctcgcatcgccggtctgggcgaacttt
gggctcgaccgcggcctgccgatctcctgcttcggctcctacatcgacgactcgatggag
gcgatcctcaacacccacgccgaggtcggcatgatgaccaaggtgggcgggggcacgagc
gggtacttcggcgatgtccgcccgcgcggcgcctccatcacgaacaacggcacgtcgaac
ggcacctacccgtttgcccagctcttcgacaaaatcattaacgtggtgagccagggcgag
acgcggcgcggccacttcgccgggtacatcgacattgagcaccccgacgtggaggagtgg
ctcaacattcagaccgagggcgacgccatccagacgatgatgtacggcgttgtcgtgggg
gacgactggatggaagcgatgatcgatggcgactcggacaagcgggccctctgggcaaaa
gtggtggagagccgaatgaacctcggcattccctacatcctcttccgcggcaacgtgcag
gacgggcgcccgcaggtctacaaggacaagggctacgacgtccacgccagcaacttgtgc
ctgaccggcgaccagcgcgtggtcacagaccggggctacaaacgggccgaagacctctgg
gaagagggcggcgagcttactctctttgacggagaggacgcgattggctcaagccgcatg
aagctacggaagaccagcgccgaggtgtacaaaatcacgctcggaaacggcgtagagcaa
aaagtaagcgctcgccatggcatgcctgtgtatcaaggcaaaagcgagtacaagcggact
gaagcccagaacgttgaggtcggtgaccggattgtgatccagaagcagaagggcctcttc
ggcgaccggcactgcccagacgaggcatttatcctcgggatgtggcagtccgacggcacc
caggctggcgacgaaaagtttatcgacatctgggagaaggacttcgaccttgccgaggag
atccaggagaagatggaccggatctacaatcggcatgggttcaacgagtacgagctcaca
aatcagcatggcggtacgttcacgcgcgaccgagaaacgccacagctgcgcgaggtcgac
gccggccactcgaacgaccgtaagaagcgtcttcagaccagagctctcacgaagcttggc
ttcgagaagggcacggtgccagagtggatttacgaggctgacgaggagactgtatgggcg
tacgtccgcggccttcttgtcgccgatggcacggcccacgtctcctatagcaagggcaat
ccattgcagattgcctatgcggacgtcgaccgggacttcctgcaagagctgcagcttctt
ttcaacaatctgggcctaagcgctcagatccgttctcttcgtgacggcaatgaagcgctc
ctcccagatggaaacggcggagagaagctttacgagacgcagaattgctaccgacttatc
gtcggcaacaaagcggcggcgctggaaatcgagcgcaacactggcttcctcacccgcaag
gacattgagctcgaggagcgctcctaccgagacaacacgaagaaggcttataaggtggtc
gacatcgagcacgtaggccaagaaacggtctactgcccgacgacccacaccgaagagtct
gtgtttgtctcccagggcgcgctgacgttcaactgctcagagatcgcgctgccgagcggg
ccggacgagagcttcgtgtgctgcctttcctcgatgaacgccctccactacgacgactgg
aaggacaccgacgcggtcgagacgctgacgcagttcctcgacgcggtgatgcaggagttt
atcgacggggccaagggaatggcgcacatggaccgggccgtgcgctttgcggagcgccac
cgggcgatcgggatcggcatcctgggctggcactcctacctgcagtcgaacaggatcccg
ttcgagtcggcggaggccagcctgaccggggccgagatcgcgaaaacgatcaaggagcgc
tcctacgcggcgtccgccgagctcgccgaccgcttcggcgagccgccggtcctggagggc
tacgggcgacgcaacgccaccacgatggccgtggcgccgaccaagtccagcagcttcatc
ctcgggcaggtcagcccgtccatcgagccgatcaagagcaactacttcgtgcaggaccgg
gcgaagatgaaggtcacgtacaagaacccccacttgcaggcgctcttgcaggaaaagggc
cgcgacaccgacgcggtgtgggacgagatcgcgctgcgcgacgggtcggtgcagcacctc
gacttcctgtccgacgaggagaaggatgtcttcaaaaccttcagcgagatcagtcagatg
gcaattatcgaccaggccgccgggcggcagaagcacatcgaccagtcgcagtccctcaac
ctggcgattgacccgggctccacgccggtcaaggacatcaaccggctctacgtcgaggcc
tggaagaagggcgtcaagtccctctactaccagcacggcgtgaacgcggcgcagagcttc
tcgcgcgacctgctggcctgcaaggcgtgcgaggcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (84)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (115)   

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