KEGG   Sinocyclocheilus rhinocerous: 107705733
Entry
107705733         CDS       T04916                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23 isoform X1
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107705733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:srx03041]
    107705733
Enzymes [BR:srx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107705733
Spliceosome [BR:srx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107705733
 Complex C
   U5 SnRNP specific factors
    107705733
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 107705733
NCBI-ProteinID: XP_016364662
UniProt: A0A673JZI9
Position
Unknown
AA seq 805 aa
MAGDSSDKKDLDAAGKEREARKRSRSRSRDRDRKGSPGRERKRNRSRERKRSRSRSKSPD
RDRRQKERDRDRGRKDRERDRDRRDKDRSKKSRSTSPKSKDLKLKREKDVKKEEEEKDEK
KEKVQPLSLEELLAKKKAEEEAESKPKFLSKGEREAEAIKRREQQTEERRRQVDEERKKR
RIFQDIGRKMLEDPQERERRERRERMERENNGNDEDDGRQKIREEKDKGKELQAIKERYL
GGMKKRRRTRHLNDRKFVFEWDASEDTSTDYNPIYKEKHQVQLYGRGFIAGIDLKQQKRD
QSRFYGDLMEKRRTLEEKEQEELRLKKVRKKEAKQRWDDRHWSQKKLDEMIDRDWRIFRE
DYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVA
ETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPL
GIRTVAVIGGISREDQGFKLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMI
DMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVER
LARSYLRRAAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLDVLASGFEPPIIIFVNQKK
GCDVLAKSLEKIGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSM
VLNYDMAKNIEDYIHRIGRTGRAGKSGMAMTFLTKEDCSVFYDLKQAILESPVSTCPPEL
ANHPDAQHKPGTILTKKRREETIFA
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggcgggcgactcctctgataagaaggacctggacgccgcagggaaggagcgggaggct
cgtaagcgcagtcgctctcgctccagggaccgtgatcggaaaggatctccgggcagagaa
cgcaaacggaaccgatcccgtgaacgcaagcgctcccgcagcagatccaaatctcctgac
cgagatcggcgtcaaaaagaaagagacagagacaggggccgcaaagacagagaaagagac
agggacagacgggacaaagaccggtccaagaaatcaaggagcacttcccctaaatccaag
gatttgaaattaaagagggagaaggatgtgaagaaagaggaagaggagaaagatgagaag
aaagagaaggtgcagcctctctctcttgaagagctgcttgctaagaagaaagcagaagaa
gaggcagaatctaagcccaagttcttgtctaaaggggagcgagaagctgaggccatcaaa
cggagggagcagcagacagaggaacgccgcagacaagtggacgaggagaggaagaaacga
agaatatttcaggacatcggcaggaagatgctagaggatcctcaggagagagaacgacgg
gaaagaagggagcggatggaaagagagaacaatgggaatgatgaagatgatgggcgacag
aagattagagaagaaaaagacaaaggaaaagagctgcaggccataaaggagcgttatctt
ggcgggatgaagaaacggcggcgcacacgccatctgaatgacaggaagtttgtctttgag
tgggatgcgtctgaagacacatcaaccgactacaatccaatctataaagaaaagcatcag
gttcagctgtacggtcgaggcttcatcgccggcatcgacctgaagcagcagaagagagat
cagtcccgattctacggagacctgatggagaagagacggacccttgaagagaaggagcaa
gaggaattgaggctgaagaaggtccgaaagaaggaggccaagcagcgctgggacgaccgg
cactggtctcagaagaagctggatgagatgatagacagagactggagaatcttcagagag
gattacagcatcacgaccaaaggaggaaagatccccaaccccatccgcaactggaaggag
tattcactgccgccacacattctggaggtcatcgaaaagtgtggatataaggatcccaca
cctatccagaggcaggccattcctattggcctgcagaaccgtgacatcattggtgtggcc
gagactggtagtggtaaaaccgccgccttcctcattcctttattggtctggatcaccact
ctgcctaagattgacaggatcgaggactcagatcagggaccgtatgccgtcattctggcc
cccactcgtgagctggcacagcagatagaggaggagacgattaaattcggcaaaccgctg
gggatccggacagtggctgtgatcggtggaatatccagagaggatcaaggcttcaaactc
aggatgggttgtgagattgtcatagccacacccggtcgtttgatcgacgtgttggaaaac
cggtacctcgtcctgagcagatgcacgtatgtggtactggacgaagccgacagaatgatt
gacatgggctttgaacccgacgtccagaagattctggagtacattcctgtgaccaatcag
aagccagacacagatgatgcggaggaccccgaaaaaatgatgcagaactttgagtcaggc
aaacacaaatacagacagacggtcatgtttacggccactatgcctcctgcagtggagcgt
ttggccagaagctacctccgacgggctgcggtggtgtacatcggctctgcaggcaaacct
cacgagagagtggagcagaaggtcatcctcatgtccgagggtgaaaagaggaagaagctg
ctggatgttttggcaagtggctttgagccgcccatcatcatcttcgttaaccagaagaag
ggttgtgatgtgctggctaagtctttggagaagattggatacaatgcttgtactcttcac
ggcggtaaaggtcaggaacagagagagttcgctctgtccaacctaaaggctggagctaag
gacatcctggtggccacagatgtggcaggcagaggtatcgacatccaggacgtctccatg
gtcctcaactacgacatggctaagaacatcgaggactatatccatcgtattggccgaacg
ggtcgtgctggaaagagtggtatggcgatgaccttcctgaccaaagaagactgttctgtg
ttctacgacctgaaacaggccatcttagaaagtcccgtgtctacctgcccgcccgagctg
gccaatcacccagatgcccagcacaagcctggcaccatccttaccaagaagaggagagag
gagaccatctttgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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