KEGG   Sinocyclocheilus rhinocerous: 107711735
Entry
107711735         CDS       T04916                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107711735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107711735
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107711735
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107711735
SSDB
Motif
Pfam: Not3 NOT2_3_5_C DUF4407
Other DBs
NCBI-GeneID: 107711735
NCBI-ProteinID: XP_016372259
UniProt: A0A673LQR9
Position
Unknown
AA seq 893 aa
MADKRKLQGEIDRCLKKVTEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPVQKE
KEEMEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRYHI
RMLETILRMLDNDSIQVDAIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEEIPTTLMA
TSPQGHIEDEMFLQSSSTPNSTTSSSPIPPSPATGTTEISEDKRGRSTDSEVSQSPVKNG
NPSLSSFSSSASSGSSSSSSSLVSVATVVGGCTAVSGGSSLLGSFSSAVQQHVPQSQQQA
QVKLSSTSAPSNNTPSPPSHPTLPASTTSSLPSSSTPGPVTSNSQSQASSVPGVECSRLG
LGLVKGGVTVTSSSSGAQMPGLGMAGMSGSLNTMAGLLSGSTPAPYAQAAAGGTAGSASS
GPVGSGSGSSGISIPSGGAGGANTGVTCNGTGAGVSMGLLGSSPGHGALTGGILNLVPGQ
TALQGSAQIPVSHVGTAPGGGTGESGLGGNGSSSVASAGVGTNVVPARPPSGLKQNGATS
YSAVVADNTPDSSLSSASQSQNSHSSSSSSSTNQTLDNGPSLLSSITLPPSSPSPAFTDS
TPGGGSLLNGPHSYTLITEAIKAPDPPSSLKAMAERAALGLTLDGEISSLHLPDRAPPGP
TTAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQESTWTHMPHPSDSERIRQYLMR
NPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHT
KYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggctgataagagaaaactacaaggtgaaatagatcgatgtttgaaaaaagttactgaa
ggcgtcgaacagtttgaagacatttggaaaaagcttcataatgcagccaatgccaatcag
aaggaaaaatatgaggccgatctcaagaaagagattaaaaagctccagcggctacgagac
cagattaagacatgggtggcatccaatgagatcaaagacaaacggcagctagtggagaac
cggaagcttattgaaacgcaaatggagcgatttaaggtggttgaaagagaaaccaagaca
aaggcctactctaaagaggggctgggcttggctcagaaagttgacccggtgcagaaagag
aaggaggaaatggaacagtggctcacgaacacaatagacactttgaacatgcaggtggac
cagtttgagagtgaagttgagtccctctctgttcaaacacggaagaagaaaggagacaaa
gagaagcaggatcggattgaagagctaaagaggttaatcgaaagacaccggtaccacatt
cgaatgctagagaccatcttgaggatgttggataatgattcgatccaggttgatgctatc
cataagatcaaagatgatgtggagtattacattgactcttcgcaagacccagactttgaa
gagaacgagttcctctatgatgatctggacttggaggagataccaacaactttgatggca
acgtctcctcagggccatattgaagatgagatgttccttcagtccagcagcacaccgaac
tccaccacttcctcttcccccatccctccatctcctgcaacaggcacaacggagatctcg
gaggataagagaggccgatctacagacagtgaagtcagtcagtctcctgtgaagaatggc
aacccatctctctcgtccttctcctcatccgcctcctcaggctcctcctcctcctcctct
tcgctggtttctgtggctactgttgttggtggctgcacagcggtctctgggggcagcagc
ctgctgggaagctttagcagcgcagtgcagcagcatgttcctcagtctcagcagcaagca
caggtcaaactctcctcgacatccgcaccctccaacaacacacctagtccacctagccac
cccacgctacctgcctccactacttcctctctgcctagttccagcacacctggcccagtt
acttccaattcccagtcccaggcctcatctgttcctggggttgagtgctctagactgggt
ttgggccttgtgaaggggggcgtgacagtgaccagcagcagtagtggggctcagatgcca
ggtctgggcatggcaggcatgtctggttctctcaacaccatggcagggcttctctcaggc
tctactcctgctccctatgcccaggcagctgctggtggaacagcaggtagtgcctccagt
ggtccagtggggagcggcagtggtagttctggtatatctataccgagcggaggtgcaggg
ggagcaaacacaggtgtgacctgtaatggcacgggtgcaggggttagtatgggcttgcta
gggtccagtccgggtcatggtgctctgaccggagggattctaaacctggtaccggggcag
acggctctccaggggtctgcacagatacctgtgagccatgtgggcacagcacctggagga
ggaactggagagagtgggttgggtggaaatggaagcagttctgtggcaagtgcaggagtg
gggacgaacgtagtgcctgcaagaccccctagcggcctcaaacaaaatggcgcaaccagt
tacagtgctgtggttgcggacaacacaccagactcctcacttagcagtgctagccaatca
caaaatagccattcctcatcctcaagctcatcaaccaatcaaactctggataatggcccc
agtttattgagttctattactctacccccctcctctccatcacctgccttcactgacagc
acacctggtggtgggagtctgctaaacggcccacactcctacacactcatcacagaagcc
atcaaggctcctgacccaccaagctctctgaaagctatggcagaacgggctgcactggga
ttgacactggatggagagatttcatcactacacctcccagatcgagccccacctggaccc
acaacggcccctcagcctgccgtttcagaggtcaacctgccgccatctttaggggcatgt
ccgctaggtcccaccccactcactaaagagcagctttaccaacaggcaatgcaggagtca
acatggacacacatgccccacccgtccgattcagagagaatcaggcagtacctgatgaga
aacccctgtcctacaccgccattccaccaccaggttcccccacatcattcggactctatt
gagttctaccagagattgtccactgaaacgctcttcttcattttctactacctggagggc
acaaaggcgcagtacttgtcggctaaagcactgaagaagcaatcgtggaggttccacacc
aaatacatgatgtggttccaacggcacgaggaacccaagaccatcactgatgagtttgaa
cagggcacgtacatttactttgactatgaaaagtggggccagagaaaaaaggaaggattt
acctttgagtacagatacctggaggacagagacctgcagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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