KEGG   Sinocyclocheilus rhinocerous: 107755534
Entry
107755534         CDS       T04916                                 
Name
(RefSeq) thrombospondin-2-like isoform X1
  KO
K04659  thrombospondin 2/3/4/5
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04145  Phagosome
srx04510  Focal adhesion
srx04512  ECM-receptor interaction
srx04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:srx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107755534
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107755534
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107755534
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107755534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:srx04131]
    107755534
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srx04147]
    107755534
   00536 Glycosaminoglycan binding proteins [BR:srx00536]
    107755534
Membrane trafficking [BR:srx04131]
 Endocytosis
  Phagocytosis
   Opsonins
    107755534
Exosome [BR:srx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107755534
  Exosomal proteins of colorectal cancer cells
   107755534
  Exosomal proteins of bladder cancer cells
   107755534
Glycosaminoglycan binding proteins [BR:srx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107755534
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN EGF
Other DBs
NCBI-GeneID: 107755534
NCBI-ProteinID: XP_016427860
Position
Unknown
AA seq 1183 aa
MILRRCLRMLALLLHFTFVKSQDAQMEDETVFDLFETSGITRKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSTAVQKLLLQIQNNEGFILTATLRQDRTSRGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLTATGGHMYVAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPEEAN
VVSESAEVVEVPSSIATNVIGQNTDVPATSSSELMCERSCEELANLLQELKGLRVVVSNL
IDGLQKVTEENTAMKEALNKMQSLSEQTMCWQDGRMFEDKEDWIVDSCTKCTCKKGKVVC
RQITCPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNTCSGPSIQTRKCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQR
GGKDCEGDGRETQGCHMDPCPIDGGWGPWSPWAMCSATCGGGLKSRVRECNSPEPQHGGR
KCLGDSTENEVCNRQECPIDGCLSNPCFSGVECITASDGSWECGPCPNGYRGNGTSCEDV
NECDMVSDLCHKVGGLQQCVNTDPGFHCLPCPTRYKGTQPYGMGVESAKTNKQVCEPYNP
CKDNSHSCHKYAECIFLSHFSDPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLVCGANA
TYHCKKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDD
VGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDLDGV
GDQCDNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYIPNANQADHDGDG
KGDACDHDDDNDGIPDDRDNCRLVSNKDQMDSDGDGRGDACENDFDNDKVPDIFDACPEN
SAISVTDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGENLRNALWHTGNTKQQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRGEQI
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgattctccgaagatgtctccgaatgttggcccttttgcttcacttcaccttcgtaaaa
tctcaagatgcacaaatggaagatgagaccgtttttgacctgtttgaaaccagtgggatc
acacgcaagactataggtgtgaagcttttcaagggtctggacagcgatgctccagcatac
cgcttcatccgttttgaccagctcccctcggtcagctccacagcggtacaaaaacttctt
ttgcagatacaaaacaacgaaggcttcattctgacagccactctgcgccaggaccgcaca
tcccgtggcaccattcttgcactggaaggccctggagagcgcaggcagtttgaagttgtt
tcggatggaagaaccaacactttagatttggtgtactggtgggctgatggctcacgcaat
gtgatctcttttgaggatgtagacctctcggattcacagtggaagaatgtaacgctttat
gtgcatggagagacagcaactttgtacattggttgtggactcattgatagctttattctc
gatgaacctttctatgaacacctgaccgccacaggtggtcatatgtatgtggccaaaggg
gccacacgagaaagccactttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagaggaggcgaat
gtagtcagtgagagcgcagaggtggtggaggttccatcttcaattgccaccaatgtgatt
ggccagaatacagatgttccagcaaccagctcctcagaactgatgtgtgaacggtcctgt
gaagaactggccaacctcctccaggagctcaagggtctcagagttgttgttagcaacctt
atagatggtctgcagaaagtgacagaagaaaacacagcgatgaaggaggcactaaataag
atgcagagtctttcggagcagactatgtgttggcaagatggccgtatgtttgaggacaaa
gaggactggattgtggatagctgtactaaatgtacctgcaaaaagggaaaagtggtttgt
cgtcaaatcacttgtcctccagtggcatgtgccaatccatccttcatcgatggcgaatgc
tgtccagtttgccttccaatggacagtgaagatggctggtctccatggtcagaatggact
cagtgcacagtcacatgtggaagtggcacacaacagagggggcgctcttgtgatgacaca
agcaatacatgttctggaccctcgattcagacacgcaagtgcagtttgggaaaatgtgac
cgcagagtccgtcaggacggtggctggagcttatggtctccatggtcatcctgctcagtg
acgtgtggagagggtctgatcacacgtatccgtcactgcaatgctcctgttccacaaaga
ggtggaaaagactgtgaaggtgacggacgagagacacaaggttgccacatggacccctgt
ccgattgatggtggctggggtccatggtctccttgggcaatgtgttcggctacatgtgga
gggggtctgaagagtcgtgttagggaatgtaacagccctgaaccacagcatggaggaagg
aagtgtcttggagactccactgaaaatgaagtatgcaaccgacaggagtgtcctattgat
ggctgtctttcgaacccttgcttctccggagtcgagtgtatcacagcttctgatggatcc
tgggaatgtggaccctgcccgaatggttatcgtggcaatggaacttcctgtgaagatgtc
aatgagtgtgatatggtatcagatctgtgtcataaggtgggtggcctacagcaatgtgtg
aatacagaccccggattccactgtctcccctgccccacgcgctacaaagggactcagccc
tacggcatgggagtggagtcagctaaaaccaacaaacaggtgtgtgaaccctacaacccc
tgcaaggacaacagccacagttgccacaagtatgctgaatgcatcttccttagtcacttc
agtgacccaatgtacaagtgcgagtgccgtatcggttatgctggagatggtatcatctgt
ggagaggactttgatctggatggatggcccaaccaggatcttgtgtgtggagcaaatgcc
acctaccattgcaaaaaggacaactgcccaactctgcccaactctggtcaggaggacttt
gacaatgatgggcaaggagatgcctgtgataaagatgatgataacgatgaaatagtggat
gaaagggacaactgccccctgatgtataaccccaggcagtatgactatgacaaggatgat
gtcggagaccgttgtgataactgcccatatgaacataaccctgctcagaccgacactgac
aacaatggggaaggagatgcctgttctattgacatggatggagatgagattctaaacgag
cgagacaactgccctctcatttacaacacagaccagaaagacaccgatttagatggtgtc
ggagaccagtgtgataactgccccttagtccacaacccacaacagacggatgcagataat
gatctaattggagaccagtgtgatgacaaccaggacatagatgaagatggccatcaaaat
aacatggataactgcccgtacatacctaatgcaaaccaagccgaccacgacggagacggg
aaaggagatgcttgtgatcatgatgatgataatgatggcattcctgatgaccgggataac
tgcagactagtttccaacaaggaccaaatggactctgatggtgacggccgtggtgatgcc
tgtgagaatgatttcgacaatgacaaagtcccggatatcttcgatgcatgcccggaaaac
agtgcaatcagcgtcacagatttccggaagtttcaaatggttcacctcgaccccaaggga
accacacagattgatccaaactgggtggtccgaaaccagggcaaagagcttgtgcaaact
gccaactccgaccctggaattgcagtgggctttgacgagttcagcgctgtggatttcagc
gggaccttctatgtgaatacagacagggatgatgattatgcaggttttgtgtttggatac
cagtctagccgacgtttttacgtagtcatgtggaaacagatcacgcagacgtactgggaa
gacaagccatcgaaggcgtttggcatctctggcgtctctctcaaggtggtcaactccaca
acaggcactggggaaaatctacgcaatgcattatggcacacaggcaacaccaagcagcag
gtgcgcactctgtggcacgacccgaagaatatcggctggaaagactataccgcctaccgc
tggcatctcatccacaggccgaagactggattcattagagttgttgtgtatgaaggcaag
cagatcatggcagactcaggccccatttatgacaaaacgtttgcaggtggacgactcggg
ttattcgttttctcccaggaggccgtcttcttctctgacctcaaatatgaatgcagaggt
gaacaaatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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