KEGG   Sinocyclocheilus rhinocerous: 107757455
Entry
107757455         CDS       T04916                                 
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
  KO
K06527  vascular cell adhesion molecule 1
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:srx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107757455 (vcam1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:srx04090]
    107757455 (vcam1)
   04091 Lectins [BR:srx04091]
    107757455 (vcam1)
CD molecules [BR:srx04090]
 Proteins
  107757455 (vcam1)
Lectins [BR:srx04091]
 I-type lectins (Siglecs)
  107757455 (vcam1)
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig V-set ICAM_N C2-set_2 Izumo-Ig ICAM1_3_5_D2 C1-set
Other DBs
NCBI-GeneID: 107757455
NCBI-ProteinID: XP_016430416
UniProt: A0A673NLL8
Position
Unknown
AA seq 777 aa
MNSALLLTLLLPVAVVSHVLDLPSEVLFKVGDRRELTCSVSSCPEKVKFVWTSLEDRPIF
AAIDSQDRESVLVFDNVMKNHENTIVCKATCEKETKQATTKIKVYSFPRNPVISGYDSLK
LGEENVLGCEVSSIHPSEFLKVQWLYEDKVLQTDEGEPERDAFSVHYIFTPSSEDDGKAI
TCRASLDVYGIPPDEMTKETSAHMTVLSAPHNVKVSGVTVVPLGSSLTLTCEAEGKPKPA
FTWTALIPGGQSVEMGKHHDLLVHNVSLSDAGTYQCDVRNDFGSQRASVSVVVQAPPMDT
LIVASPQSILKEGDSVSFSCKSSGVPVTHVVLSRRVNGVKTELMSSEGAETSVALLSVKL
GDSGMFVCEAFNEYGRQETTLNLTVEAHLLEVALQPDGEVMSERGSSLVLSCQASGCPQP
EFSWKNLSNMPILRRLKTDGFQSQLFFDLVELEDEGTYLCEVTCGSIKKSKLTEVKVFSF
PSPVVKNSGPSLVGEIMKLTCTVQEVFPANLFQILWMDGEREMHSETGSFSSGTTNLTSV
YSYYVDTEDQDKHITCKVLLEMHGVPAAQSVKTASTTLSIHYPPRVTRITVSPLTELKEG
ESVSISCLSDSFPVGRTVLSRVEDGIQTELMANDGLETLFTILSVELDDSGIYICETSNM
YGSHNDSVEITIKAPPRNMTVEIFPSTDVQEGQNITICCRSVSFPPPAVVLSKLDSEKNV
YSLDGVFLLINLTPNDTGLYQVNVTNYLGYETEIFNINVMEKIVNPPLGWNDFFLVD
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgaattcagctttactgttgactttgcttctaccagttgcagttgtttcccatgtactg
gacctgccgtctgaagttctgttcaaagtgggcgacaggagagagttgacttgcagcgta
tcatcttgcccagagaaggtgaagtttgtttggacctcattagaagacagaccgatattc
gctgctattgattcacaggacagagaatctgtgctggtctttgacaacgtgatgaagaat
cacgaaaacaccatagtgtgcaaagcaacctgtgaaaaggagacaaaacaggcgacaaca
aagattaaagtttattcttttccaagaaacccagttatatccggatatgatagcttgaaa
ctgggcgaggaaaatgtcttgggctgtgaagtgtcttctatacacccttcagagttcctt
aaagtgcagtggctctatgaagacaaagttcttcagactgatgagggagaacctgagaga
gatgcattttcagttcattacatattcacgccttcaagtgaggatgatgggaaggcgata
acatgcagagcatcactcgatgtgtatggtataccacctgatgagatgaccaaggagacg
tctgcacacatgacagttctctctgcaccgcataacgttaaagtatctggagtgactgtt
gtcccactgggatccagtttaactttgacctgtgaggccgagggcaagccaaagcctgcg
tttacatggacggctcttataccaggtggccagtctgtggaaatgggaaaacatcatgat
ctcctcgtacataacgtgtccttatcagatgctggtacttaccagtgtgatgttagaaat
gactttggaagccaaagggccagcgtttcagtagtcgttcaagcacctcctatggatact
ctcattgtagcaagtccacaatccattctgaaggaaggagactctgtgagcttttcctgc
aagtccagcggagttccagtgacacacgtggtgctcagcaggagggtgaatggtgtaaaa
acagagctaatgtctagtgaaggggctgaaacatcagttgccctcctctccgtcaagctg
ggtgactctggcatgtttgtgtgtgaggctttcaatgagtatggcaggcaggagaccact
ctcaatctaactgttgaagctcatttgctagaagtggcgctacaaccggacggtgaggtc
atgtcggagagaggctccagcctggtcctctcctgtcaggcttcaggttgccctcaaccc
gagttctcctggaagaatctttcaaatatgccgatcctcaggcggcttaagacagatggc
ttccagtcccagctgtttttcgatctagtagagttggaagacgagggaacttacctttgt
gaggtcacatgtggctcaatcaagaagtccaaactaacagaagtgaaggtgttttcattt
ccaagtcctgtcgtaaaaaactctggaccttctctggtgggagagataatgaaattgacc
tgcactgttcaggaagttttcccggccaaccttttccaaatcctgtggatggatggagag
agagaaatgcattcggaaactggatcattttcaagtggtacaacaaatctgacttcagtg
tattcttactacgtagacactgaagaccaagacaaacacatcacctgcaaagttttgctg
gaaatgcatggtgtgccagctgctcaatcagtaaagacagcatctactacattgtccatt
cactatcccccgagagtgaccaggattactgtgagcccactgacagagttaaaggaagga
gaatccgtaagcatttcttgcctttccgacagctttccagtggggcgtacagtgctgagc
agggtggaggacggcatacaaacagagctaatggccaatgatgggcttgaaacattgttt
accatcctttcagtcgagttggatgactctggcatctatatttgtgaaacttctaacatg
tatggaagccacaatgatagtgtggagattaccattaaagcaccacccaggaatatgaca
gtggagatctttccatccacggatgttcaggaggggcagaatatcaccatctgttgtcgc
tccgtgagcttccctccacctgcggtggtcctcagtaagctggatagtgagaaaaatgtc
tactctcttgatggtgtattcctactgatcaacctcacacccaacgacacaggcctatac
caggtcaacgtcaccaactatctgggctacgagacagagatttttaacatcaatgtgatg
gagaaaatagtcaaccctccattaggctggaatgatttttttttggtggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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