KEGG   Serratia plymuthica S13: M621_25200Help
Entry
M621_25200        CDS       T02716                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sry  Serratia plymuthica S13
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sry00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M621_25200
Enzymes [BR:sry01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M621_25200
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M621_25200
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5366201..5367010)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDRPVRSVQRRAKYLL
IELDHGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCEDL
ANSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPDRPAASLSKMEAELLVETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTSIESAKHGQRSTFFCRRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgagaccagccgacgtggtattgaaccttatcttgtcggc
catagcattcagtatgcggtggtgcgcaacgcgcggctgcgttggcctgtttccgagcaa
attctggcgctgagcgaccgaccggtacgcagcgtacaacgccgcgccaagtatctgctg
attgaactggaccacggctggattatcgtccatttggggatgtccggcagcctgcgtatg
ctggctgaggaaaccgaagccggtaagcacgaccatgttgatctggtgatcagcaacggc
atgacgctgcgttataccgatccccgccgttttggcgcctggctgtggtgcgaagacctg
gcgaacagcaatgtgctggcccaccttgggccggaaccgctaagtgaagcctttactggc
gcctacctgtacgaaaaatcgcgcaataagcgcacgctgatcaaaccctggctgatggat
aacaagctggtcgtaggggttggcaatatctacgccagcgaatcactgttcaccgccggg
atcctgcccgatcgcccggccgcttcgctgagcaaaatggaagctgagttgctggtggag
actatcaaggcggtattgctacgctcgattgagcaagggggtaccacgctgcgcgatttc
ctgcagtcggacggtaaaccaggctatttcgcgcaagaattgcaggtgtatggtcgtgcg
ggtgagccttgccgcgcgtgcggcacgtcgattgaatccgctaaacacgggcagcgcagt
accttcttctgccgtcgctgccaacgctga

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