KEGG   Serratia rubidaea: AXX16_0378
Entry
AXX16_0378        CDS       T04417                                 
Name
(GenBank) Porphobilinogen deaminase
  KO
K01749  hydroxymethylbilane synthase [EC:2.5.1.61]
Organism
srz  Serratia rubidaea
Pathway
srz00860  Porphyrin metabolism
srz01100  Metabolic pathways
srz01110  Biosynthesis of secondary metabolites
srz01120  Microbial metabolism in diverse environments
srz01240  Biosynthesis of cofactors
Module
srz_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
srz_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:srz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    AXX16_0378
Enzymes [BR:srz01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.61  hydroxymethylbilane synthase
     AXX16_0378
SSDB
Motif
Pfam: Porphobil_deam Porphobil_deamC
Other DBs
NCBI-ProteinID: AML56123
Position
397935..398876
AA seq 313 aa
MLDKIIRIATRQSPLALWQAHYVQQRLMDSHPGLRVELVPMVTRGDIILDTPLAKVGGKG
LFVKELELALLEGRADIAVHSMKDVPVEFPQGLGLVTICERDDPRDAFVSNRFESLDQLP
QGSVVGTSSLRRQCQLRQRRPDLIVRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLE
QRIRSAMSPEESLPAVGQGAVGIECRLDDEVTRTLLAPLNDEATALRVSAERAMNTRLEG
GCQVPIGSYAELDGDTLWLRALVGAPDGSQMVRGERSGPAAQAQQMGVSLAEELLANGAR
EILQDVYQGDPPA
NT seq 942 nt   +upstreamnt  +downstreamnt
atgttagacaaaattattcgaattgccacccgacaaagccctctggcgctctggcaggca
cactatgtgcagcagcgtctgatggacagccaccccggcctgcgggtggagctggtgccg
atggtgacgcgcggcgacatcattctggatacgccgctggcgaaggtcggcggtaagggc
ttgtttgtcaaagaacttgagctggcgctgctggaaggccgcgccgatatcgccgtgcac
tcgatgaaagacgtgccggtagaatttccgcaggggctgggtttggtgaccatttgcgag
cgtgacgatccgcgcgacgcatttgtatcaaaccgtttcgaatccctcgatcaactgccg
cagggcagcgtggtcggcacctccagcctgcgtcgtcagtgccagctgcgccagcgtcgc
cccgacctgatcgtgcgcgatctgcgcggcaacgtcggcacccgcctgtccaaactggat
aacggcgagtatgacgccattattctggcggtcgccggcctgaagcggctggggctggag
cagcgcatccgcagcgccatgagcccggaagagtccctgccggccgtcggccagggcgcc
gtcggcatcgaatgccggctggacgacgaggtgacccgcacgctgctggcgccgctgaac
gatgaggcgaccgccctgcgcgtcagcgccgaacgcgccatgaacacccgtctggaaggc
ggctgtcaggtgccgatcggcagctatgccgagctggacggcgatacgctgtggctgcgc
gcgctggtcggcgcgccggacggcagccagatggtgcgcggcgaacgcagcggcccggcc
gcacaggcgcagcaaatgggcgtctcgctggcggaagaactgctggccaacggcgcgcgt
gaaattctgcaggacgtgtatcagggagatccgccggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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