KEGG   Serratia rubidaea: AXX16_0642
Entry
AXX16_0642        CDS       T04417                                 
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
srz  Serratia rubidaea
Pathway
srz00540  Lipopolysaccharide biosynthesis
srz01100  Metabolic pathways
srz01250  Biosynthesis of nucleotide sugars
Module
srz_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:srz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    AXX16_0642
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:srz01005]
    AXX16_0642
Enzymes [BR:srz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     AXX16_0642
Lipopolysaccharide biosynthesis proteins [BR:srz01005]
 Core region
  AXX16_0642
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 KR adh_short Shikimate_DH
Other DBs
NCBI-ProteinID: AML56377
UniProt: A0A447QLB2
Position
complement(699894..700826)
AA seq 310 aa
MIIVTGGAGMIGSNIVKALNDKGYRDILVVDNLKDGTKFVNLVDLDIADYMDKEDFIASI
VAGDDFGDVEAIFHEGACSATTEWDGKYMMDNNYQYSKDLLHYCLDRQIPFLYASSAATY
GGRSENFIEERQYEQPLNVYGYSKFLFDQYVREILPEADSQVCGFRYFNVYGPREGHKGS
MASVAFHLNGQIGRGENPKLFAGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ETFQAVADAVVDFHQKGAVEYIEFPEKLKGRYQAYTQADLTNLRAAGYTAPFKTVAEGVK
EYMAWLNRTA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgattatcgtcactggcggcgccggcatgatcggcagcaacatcgttaaggcactgaat
gacaaagggtatcgtgacattctggtggtcgataacctgaaagacggcaccaaattcgtc
aatctggtcgatctcgatattgccgactatatggataaggaagattttatcgccagcatc
gttgccggcgacgatttcggcgatgtcgaagcgatattccatgaaggcgcctgctccgcc
accaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagatctg
ctgcactactgcctggatcgccagattcctttcctgtacgcctcttccgccgccacctac
ggcggccgcagcgaaaactttatcgaagaacgccagtacgagcagccgctgaacgtttac
ggctactccaaattcctgttcgaccagtacgtgcgtgaaattctgccggaggccgactct
caagtgtgcggcttccgctatttcaacgtctacggcccgcgtgaaggccacaagggcagc
atggcgagcgtggccttccacctcaacggccagatcggccgcggtgagaacccgaaactg
ttcgccggcagcgaaaacttcaagcgcgacttcatctacgtcggcgacgtggcggcggtt
aacctgtggttctggcagaacggcgtctccggcatcttcaactgcggcaccggccgggcg
gaaaccttccaggcggtagccgacgcggtggtggacttccaccaaaaaggtgcggtggaa
tatattgagttcccggaaaagctgaagggccgctatcaggcctatacccaggccgatctg
accaatctgcgcgcggcgggttacaccgcaccgtttaaaacggtcgccgaaggcgtcaaa
gagtacatggcctggctcaaccgcaccgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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