KEGG   Serratia rubidaea: AXX16_0904
Entry
AXX16_0904        CDS       T04417                                 
Name
(GenBank) TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
  KO
K07566  L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
Organism
srz  Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:srz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srz03009]
    AXX16_0904
   03016 Transfer RNA biogenesis [BR:srz03016]
    AXX16_0904
Enzymes [BR:srz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.87  L-threonylcarbamoyladenylate synthase
     AXX16_0904
Ribosome biogenesis [BR:srz03009]
 Prokaryotic type
  Other maturation factors
   AXX16_0904
Transfer RNA biogenesis [BR:srz03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AXX16_0904
 Prokaryotic type
    AXX16_0904
SSDB
Motif
Pfam: Sua5_yciO_yrdC EAD11 Stu2_CTS
Other DBs
NCBI-ProteinID: AML56632
UniProt: A0A126VEI4
Position
963397..963954
AA seq 185 aa
MSSEFTAIINALNNQQVVAYPTEAVFGLGCDPDSDQALHKLLDLKQRPWEKGLILIAADY
QQLLPYIDDSRLTPSQRETIFASWPGPVTWVIPAKPTTPRLLTGRFDSLAVRVSDHPLVQ
RLCREFGKPLVSTSANLSGQPPCRHAAEVTQQFGERFPVLSGNVGGRQNPSEIRDALTGE
QIRQG
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagctcagaattcaccgccatcattaatgcactgaataatcaacaggtcgtcgcctat
cctaccgaggctgtgtttggcctgggttgcgatcctgatagcgatcaagcgttgcacaag
ctgttggatttaaaacagcgcccgtgggaaaaggggttgatcctgattgccgccgactac
cagcagctgctgccttatatcgacgacagccgcctgacgccatcgcaacgtgaaacgatc
tttgccagctggcctggtccggttacgtgggttatcccggccaaaccgactacgccgcgt
ctgttgaccgggcgtttcgattcgctggcggtgcgcgtcagcgaccacccgctggtgcag
cggctatgccgcgagtttggcaaaccgctggtatcaaccagcgccaatcttagcggtcag
ccgccgtgccgccatgctgcagaagtcacgcagcagttcggcgaaaggttcccggtgctg
tcgggcaatgtgggcggacgtcagaatccgtcggaaatcagagatgcgttgaccggtgag
cagatccggcagggctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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