KEGG   Serratia rubidaea: AXX16_3810
Entry
AXX16_3810        CDS       T04417                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
srz  Serratia rubidaea
Pathway
srz00470  D-Amino acid metabolism
srz00550  Peptidoglycan biosynthesis
srz01100  Metabolic pathways
srz01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:srz00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AXX16_3810
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AXX16_3810
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AXX16_3810
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:srz01011]
    AXX16_3810
Enzymes [BR:srz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AXX16_3810
Peptidoglycan biosynthesis and degradation proteins [BR:srz01011]
 Precursor biosynthesis
  Amino acid ligase
   AXX16_3810
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST RimK ATP-grasp_3 GARS_A
Other DBs
NCBI-ProteinID: AML59501
UniProt: A0A448S0B5
Position
complement(4116116..4117222)
AA seq 368 aa
MTKRRVGVIFGGKSAEHEVSLQSAKNIVDAIDKEKFDVTLLGIDKQGQWHINDASNYLLH
AENPALIALNHSNKNVALVPGQESSQLIEADSANVIGQLDVVFPIVHGTLGEDGSLQGLL
RMANIPFVGAGVLGSAVSMDKDVTKRLLRDAGLEVAPFVTLTRSNRAQHSFEQLSAQLGS
PLFIKPANQGSSVGVSRVSDPAGYEQAVALAFSFDHKVLVESAIVGREIECAVLGNDQPQ
ASLCGEIVLSDEFYSYDTKYINEQGAQVVVPAAISEQASDKVRDVALRAFRALDCLGMAR
VDVFLTEDERVIVNEINTLPGFTNISMYPKLWAASGMSYSQLITTLIELALERHQQDRAL
HSSVFDRD
NT seq 1107 nt   +upstreamnt  +downstreamnt
gtgactaaacgacgtgttggcgtaatttttggtggtaaatcggcggagcatgaggtttcg
ctgcagtcggcaaaaaacattgtcgatgccatcgacaaagagaagtttgacgtcacgctg
ctgggcatcgacaagcaggggcagtggcatattaacgatgcctccaactacctgctgcat
gcggaaaacccggcgctgatcgccctgaaccactcgaataaaaacgtggcgctggtgccg
gggcaggagagcagccaactgattgaggccgacagcgccaacgttatcggccagctcgac
gtggtgttcccgatcgtacacggcacgctgggggaggacggttcgctgcaggggctgctg
cggatggcgaacatcccgtttgtcggcgccggcgtgctcggctcggcggtcagcatggat
aaagacgtcaccaaacgcctgctgcgcgacgccgggctggaggtggcgccgttcgtcacc
ctgacgcgcagcaaccgcgcgcagcacagttttgagcagctgagcgcgcagctggggtcg
ccgctgtttatcaagccggccaaccagggttcctccgtcggcgtcagccgggtcagcgac
ccggcaggctatgagcaggcggtggcgctggcgttcagcttcgaccacaaggtgctggtg
gagtcggcgattgtcggccgtgagattgagtgcgcggtgctgggcaacgaccagccgcag
gccagcctgtgcggggaaatcgtgctgagcgacgaattctactcctacgacaccaaatac
attaacgagcagggcgctcaggtggtggtgccggcggcgatctccgagcaggccagcgat
aaggtgcgcgacgtcgcgctgcgggcgttccgcgcgctggactgcctgggcatggcgcgc
gtcgacgtgttcctcaccgaggatgagcgggtgatcgtcaacgaaatcaacacgctgccc
ggctttaccaatatcagcatgtatccgaagctgtgggcggccagcggcatgagctacagc
cagctgatcaccaccctgatcgaactggcgctggagcgtcaccagcaggaccgtgcgctg
cacagttcggtgttcgatcgcgactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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